RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 IFNA5P01569 189 aa17.19■□□□□ 0.34
PRKCH-216ENST00000555542 BATF3Q9NR55 127 aa17.19■□□□□ 0.34
PRKCH-216ENST00000555542 FUT9Q9Y231 359 aa17.19■□□□□ 0.34
PRKCH-216ENST00000555542 GAGE12BA1L429 117 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 GAGE7O76087 117 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 GAGE12FP0CL80 117 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 GAGE12GP0CL81 117 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 GAGE12IP0CL82 117 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 RPL12P30050 165 aaKnown RBP17.18■□□□□ 0.34
PRKCH-216ENST00000555542 OR5I1Q13606 314 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 TMEM78Q5T7P6 136 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 AGPAT4-IT1Q9H0P7 198 aa17.18■□□□□ 0.34
PRKCH-216ENST00000555542 IGKV2-40A0A087WW87 121 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-216ENST00000555542 IGKV2D-40P01614 121 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-216ENST00000555542 FFAR4Q5NUL3 377 aa17.17■□□□□ 0.34
PRKCH-216ENST00000555542 RNF141Q8WVD5 230 aa17.17■□□□□ 0.34
PRKCH-216ENST00000555542 MBD2Q9UBB5 411 aa17.17■□□□□ 0.34
PRKCH-216ENST00000555542 PRSS29PA6NIE9 313 aa17.16■□□□□ 0.34
PRKCH-216ENST00000555542 GPX1P07203 203 aa17.16■□□□□ 0.34
PRKCH-216ENST00000555542 RNASE4P34096 147 aaKnown RBP17.16■□□□□ 0.34
PRKCH-216ENST00000555542 FAM3BP58499 235 aaPredicted RBP17.16■□□□□ 0.34
PRKCH-216ENST00000555542 BTN1A1Q13410 526 aa17.16■□□□□ 0.34
PRKCH-216ENST00000555542 FXYD5Q96DB9 178 aa17.16■□□□□ 0.34
PRKCH-216ENST00000555542 NACAE9PAV3 2078 aa17.16■□□□□ 0.34
PRKCH-216ENST00000555542 CCL18P55774 89 aa17.15■□□□□ 0.34
PRKCH-216ENST00000555542 SOHLH1Q5JUK2 328 aa17.15■□□□□ 0.34
PRKCH-216ENST00000555542 C9orf47Q6ZRZ4 202 aa17.15■□□□□ 0.34
PRKCH-216ENST00000555542 KLLNB2CW77 178 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 RTL8CO15255 209 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 CSN1S1P47710 185 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 UBE2L3P68036 154 aaKnown RBP17.14■□□□□ 0.33
PRKCH-216ENST00000555542 CD300CQ08708 224 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 PHYHIPLQ96FC7 376 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 VGLL1Q99990 258 aa17.14■□□□□ 0.33
PRKCH-216ENST00000555542 TAS2R45P59539 299 aa17.13■□□□□ 0.33
PRKCH-216ENST00000555542 RANP62826 216 aaKnown RBP17.13■□□□□ 0.33
PRKCH-216ENST00000555542 KHDC3LQ587J8 217 aa17.13■□□□□ 0.33
PRKCH-216ENST00000555542 Q6ZR54 194 aa17.13■□□□□ 0.33
PRKCH-216ENST00000555542 LINC00612Q8N6U2 182 aa17.13■□□□□ 0.33
PRKCH-216ENST00000555542 GNPNAT1Q96EK6 184 aaPredicted RBP17.13■□□□□ 0.33
PRKCH-216ENST00000555542 FAM19A4Q96LR4 140 aa17.13■□□□□ 0.33
PRKCH-216ENST00000555542 TRAV26-1A0A087WT03 109 aa17.12■□□□□ 0.33
PRKCH-216ENST00000555542 EIF4E3Q8N5X7 224 aaKnown RBP17.12■□□□□ 0.33
PRKCH-216ENST00000555542 GSN-AS1Q9NRJ2 163 aa17.12■□□□□ 0.33
PRKCH-216ENST00000555542 A0A0J9YY99 117 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 RGS13O14921 159 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 CRISP2P16562 243 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 M6PRP20645 277 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 DAZ2Q13117 558 aaKnown RBP17.11■□□□□ 0.33
PRKCH-216ENST00000555542 ZNF492Q9P255 531 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 ALG5Q9Y673 324 aa17.11■□□□□ 0.33
PRKCH-216ENST00000555542 TRGV2A0A075B6R0 118 aa17.1■□□□□ 0.33
PRKCH-216ENST00000555542 ZNF324O75467 553 aaPredicted RBP17.1■□□□□ 0.33
PRKCH-216ENST00000555542 NMBP08949 121 aa17.1■□□□□ 0.33
PRKCH-216ENST00000555542 C1orf134Q5TEV5 83 aa17.1■□□□□ 0.33
PRKCH-216ENST00000555542 Q6ZTI0 123 aa17.1■□□□□ 0.33
PRKCH-216ENST00000555542 Q9H3A6 140 aa17.1■□□□□ 0.33
PRKCH-216ENST00000555542 HECTD4Q9Y4D8 3996 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 ZNF138P52744 262 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 LYPD1Q8N2G4 141 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 Q8TAT8 98 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 LINC00467Q9BRT7 94 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 TMPRSS5Q9H3S3 457 aa17.09■□□□□ 0.33
PRKCH-216ENST00000555542 TRGV1A0A0A0MS02 117 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 HOXA5P20719 270 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 ACOT6Q3I5F7 207 aaPredicted RBP17.08■□□□□ 0.32
PRKCH-216ENST00000555542 ANXA2RQ3ZCQ2 193 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 ZFAND2AQ8N6M9 145 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 ZNF503Q96F45 646 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 ARPC5LQ9BPX5 153 aa17.08■□□□□ 0.32
PRKCH-216ENST00000555542 A0A1W2PPV4 95 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 PRR9Q5T870 116 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 SSX7Q7RTT5 188 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 C11orf72Q8NBR9 251 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 RXFP4Q8TDU9 374 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 WFDC1Q9HC57 220 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 LINC00588Q9Y4M8 146 aa17.07■□□□□ 0.32
PRKCH-216ENST00000555542 A0A1B0GVY2 172 aa17.06■□□□□ 0.32
PRKCH-216ENST00000555542 EIF3GO75821 320 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCH-216ENST00000555542 ZNRF2Q8NHG8 242 aa17.06■□□□□ 0.32
PRKCH-216ENST00000555542 HYLS1Q96M11 299 aa17.06■□□□□ 0.32
PRKCH-216ENST00000555542 IGHV1OR15-1A0A075B7D0 117 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 RBAKDNA6NC62 111 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 PTTG1O95997 202 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 CMTM2Q8TAZ6 248 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 RPH3ALQ9UNE2 315 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 KLF12Q9Y4X4 402 aa17.05■□□□□ 0.32
PRKCH-216ENST00000555542 TCL1AP56279 114 aa17.04■□□□□ 0.32
PRKCH-216ENST00000555542 FAM74A1Q5RGS3 127 aa17.04■□□□□ 0.32
PRKCH-216ENST00000555542 IBA57Q5T440 356 aaKnown RBP17.04■□□□□ 0.32
PRKCH-216ENST00000555542 MED28Q9H204 178 aa17.04■□□□□ 0.32
PRKCH-216ENST00000555542 TP53TG3Q9ULZ0 132 aa17.04■□□□□ 0.32
PRKCH-216ENST00000555542 TRBV7-9A0A0J9YWB2 115 aa17.03■□□□□ 0.32
PRKCH-216ENST00000555542 NBDYA0A0U1RRE5 68 aa17.03■□□□□ 0.32
PRKCH-216ENST00000555542 DIRC3C9JPN6 131 aa17.02■□□□□ 0.32
PRKCH-216ENST00000555542 RAB2AP61019 212 aa17.02■□□□□ 0.32
PRKCH-216ENST00000555542 ZNF266Q14584 549 aa17.02■□□□□ 0.32
PRKCH-216ENST00000555542 PQLC2Q6ZP29 291 aa17.02■□□□□ 0.32
PRKCH-216ENST00000555542 Q6ZQT7 251 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms