RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ZNF705FA8MVS1 300 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-218ENST00000555213 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 PEX7O00628 323 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 RPL35P42766 123 aaKnown RBP8.07□□□□□ -1.12
SHMT2-218ENST00000555213 RPL23P62829 140 aaKnown RBP8.07□□□□□ -1.12
SHMT2-218ENST00000555213 PSG9Q00887 426 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 ZNF674Q2M3X9 581 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 ACTL10Q5JWF8 245 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 C5orf17Q8NAS9 161 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 ZNF738Q8NE65 137 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 HIST1H2BAQ96A08 127 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 TVP23CQ96ET8 276 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 SMIM7Q9BQ49 75 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 TCEAL7Q9BRU2 100 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 KIR2DL5BA0A0G2JN68 375 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 KIR2DL5BA0A0G2JPC4 375 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 C7orf77A4D0Y5 90 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 NHLRC4P0CG21 123 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-218ENST00000555213 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
SHMT2-218ENST00000555213 TAS2R60P59551 318 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 ZNF124Q15973 351 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 TMEM183BQ1AE95 376 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 KIR2DL5AQ8N109 375 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 SVBPQ8N300 66 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 RNF182Q8N6D2 247 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 SGK494Q96LW2 274 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 NAT8Q9UHE5 227 aa8.06□□□□□ -1.12
SHMT2-218ENST00000555213 TRBV6-1A0A0K0K1D8 114 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
SHMT2-218ENST00000555213 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
SHMT2-218ENST00000555213 KNCNA6PVL3 124 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 C9JCJ5 164 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 K7EN84 100 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 UBE2CO00762 179 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
SHMT2-218ENST00000555213 HLA-DRB4P13762 266 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
SHMT2-218ENST00000555213 PSG3Q16557 428 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 SPATA25Q9BR10 227 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 ATG101Q9BSB4 218 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 SAV1Q9H4B6 383 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-218ENST00000555213 ZMAT4Q9H898 229 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 LY96Q9Y6Y9 160 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 HLA-DRB4X5D2U9 266 aa8.05□□□□□ -1.12
SHMT2-218ENST00000555213 TRAV8-1A0A0A6YYK1 113 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 SNAPINO95295 136 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 AKR1C3P42330 323 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 MORN3Q6PF18 240 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-218ENST00000555213 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-218ENST00000555213 GOLT1AQ6ZVE7 132 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
SHMT2-218ENST00000555213 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 MRPL53Q96EL3 112 aaKnown RBP8.04□□□□□ -1.12
SHMT2-218ENST00000555213 ASCL2Q99929 193 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 VGLL1Q99990 258 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 NIPSNAP3BQ9BS92 247 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 PRELID1Q9Y255 219 aa8.04□□□□□ -1.12
SHMT2-218ENST00000555213 H3BMM0 161 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
SHMT2-218ENST00000555213 CA1P00915 261 aaPredicted RBP8.03□□□□□ -1.12
SHMT2-218ENST00000555213 GCGP01275 180 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 LTAP01374 205 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 DEFB1P60022 68 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 OR4B1Q8NGF8 309 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 CSTL1Q9H114 145 aa8.03□□□□□ -1.12
SHMT2-218ENST00000555213 IGKV2-40A0A087WW87 121 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 A0A0J9YX75 114 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 M0R036 132 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 IGKV2D-40P01614 121 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 S100A9P06702 114 aaKnown RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 CSN1S1P47710 185 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 CRIP1P50238 77 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 CNN1P51911 297 aaKnown RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 PNRC1Q12796 327 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-218ENST00000555213 ERCC8Q13216 396 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 OR5I1Q13606 314 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 Q6ZWC4 215 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 BAGE2Q86Y30 109 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 TMEM75Q8N9X5 138 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 CMTM2Q8TAZ6 248 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 FMC1Q96HJ9 113 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 PPP1R14DQ9NXH3 145 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 RPH3ALQ9UNE2 315 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 PSG8Q9UQ74 426 aa8.02□□□□□ -1.13
SHMT2-218ENST00000555213 A0A087WWC5 75 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 B4DEV8 164 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 F6UB75 175 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms