RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 MRPL40Q9NQ50 206 aaKnown RBP2.34□□□□□ -2.03
PSEN1-211ENST00000554995 C8orf4Q9NR00 106 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 OSTCQ9NRP0 149 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 CKLFQ9UBR5 152 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 SPTA1P02549 2419 aa2.34□□□□□ -2.03
PSEN1-211ENST00000554995 ATG2AQ2TAZ0 1938 aa2.34□□□□□ -2.04
PSEN1-211ENST00000554995 MYO7AQ13402 2215 aa2.34□□□□□ -2.04
PSEN1-211ENST00000554995 C2CD3Q4AC94 2353 aa2.34□□□□□ -2.04
PSEN1-211ENST00000554995 SPTAN1Q13813 2472 aaKnown RBP2.33□□□□□ -2.04
PSEN1-211ENST00000554995 FREM2Q5SZK8 3169 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 TRBV19A0A075B6N1 114 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 ZNF860A6NHJ4 632 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 BBIP1A8MTZ0 92 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 C1orf196B1AJZ1 125 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 IBA57-AS1B1ANH7 110 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 H0YJX3 145 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 J3QRK9 145 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 PRB1P04280 392 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 METTL15P1P0C7V9 234 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 HMGA1P17096 107 aaKnown RBP2.33□□□□□ -2.04
PSEN1-211ENST00000554995 GTF2A1P52655 376 aaPredicted RBP2.33□□□□□ -2.04
PSEN1-211ENST00000554995 PIGPP57054 158 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 YPEL3P61236 119 aaPredicted RBP2.33□□□□□ -2.04
PSEN1-211ENST00000554995 RHOBP62745 196 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 DEFB103AP81534 67 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 DHFR2Q86XF0 187 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 ZNF439Q8NDP4 499 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 OR8B3Q8NGG8 313 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 NEK7Q8TDX7 302 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 LYSMD1Q96S90 227 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 SERPINI1Q99574 410 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 RELNP78509 3460 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 WDFY3Q8IZQ1 3526 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 ARHGAP32A7KAX9 2087 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 HEATR5BQ9P2D3 2071 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 IGF2RP11717 2491 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 LAMA5O15230 3695 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 MUC22E2RYF6 1773 aaPredicted RBP2.33□□□□□ -2.04
PSEN1-211ENST00000554995 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
PSEN1-211ENST00000554995 AKAP13Q12802 2813 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 SMIM24O75264 130 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 PIAS1O75925 651 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 HTR1AP08908 422 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 CRYGAP11844 174 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 COX4I1P13073 169 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 IDO1P14902 403 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 KHDC3LQ587J8 217 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 LYRM7Q5U5X0 104 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 DPPA3Q6W0C5 159 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 ZCCHC23Q6ZST2 131 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 C7orf65Q6ZTY9 151 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 WFDC11Q8NEX6 87 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 OR5A1Q8NGJ0 315 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 STAG3L4Q8TBR4 150 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 WFDC5Q8TCV5 224 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 MED29Q9NX70 200 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 PRNDQ9UKY0 176 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 AMMECR1Q9Y4X0 333 aaPredicted RBP2.32□□□□□ -2.04
PSEN1-211ENST00000554995 CCDC88CQ9P219 2028 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 F5P12259 2224 aa2.32□□□□□ -2.04
PSEN1-211ENST00000554995 CREBBPQ92793 2442 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 FANCMQ8IYD8 2048 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 NINQ8N4C6 2090 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 A0A0D9SG52 128 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 C19orf84I3L1E1 186 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 SDCBPO00560 298 aaPredicted RBP2.31□□□□□ -2.04
PSEN1-211ENST00000554995 CYB5BO43169 146 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 PMP2P02689 132 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 RPS3P23396 243 aaKnown RBP eCLIP2.31□□□□□ -2.04
PSEN1-211ENST00000554995 TAS2R41P59536 307 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 ZNF345Q14585 488 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 Q6ZQT0 140 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 AAED1Q7RTV5 226 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 ARPINQ7Z6K5 226 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 GINS3Q9BRX5 216 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 Q9H521 79 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 SS18L2Q9UHA2 77 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 HS3ST2Q9Y278 367 aa2.31□□□□□ -2.04
PSEN1-211ENST00000554995 GOLGA4Q13439 2230 aaKnown RBP2.31□□□□□ -2.04
PSEN1-211ENST00000554995 SNRNP200O75643 2136 aaKnown RBP2.3□□□□□ -2.04
PSEN1-211ENST00000554995 TCRBV3S1A0A5B6 114 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 G3V2T6 193 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 TCL1BO95988 128 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 IFNA7P01567 189 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 GNG3P63215 75 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 GNG5P63218 68 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 RHEBQ15382 184 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 NNATQ16517 81 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 DEFB107AQ8IZN7 70 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 SMIM20Q8N5G0 67 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 OR13C6PQ8NH95 151 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 ADAT3Q96EY9 351 aaPredicted RBP2.3□□□□□ -2.04
PSEN1-211ENST00000554995 CST9LQ9H4G1 147 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 PCTPQ9UKL6 214 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 NDUFAF1Q9Y375 327 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 LHFPL6Q9Y693 200 aa2.3□□□□□ -2.04
PSEN1-211ENST00000554995 MDC1Q14676 2089 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms