RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SMLR1H3BR10 107 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 CCSO14618 274 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 SCGB2A1O75556 95 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 PGLYRP1O75594 196 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-228ENST00000554592 NMBP08949 121 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 G6PCP35575 357 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 NUP62P37198 522 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-228ENST00000554592 SNCAP37840 140 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 FXYD7P58549 80 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 TAS2R46P59540 309 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-228ENST00000554592 PSG9Q00887 426 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 SPATA31B1PQ5VZV4 182 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF818PQ6ZRF7 136 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 ARRDC1Q8N5I2 433 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 C12orf45Q8N5I9 185 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-228ENST00000554592 C11orf52Q96A22 123 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 SPXQ9BT56 116 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 MAGT1Q9H0U3 335 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 Q9H3A6 140 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 KANTRA0A1W2PQU2 76 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 MEIS3P1A6NDR6 274 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 CORTO00230 105 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 SSX5O60225 188 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 CD3DP04234 171 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ATP5G1P05496 136 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 PTHLHP12272 177 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 CXCL2P19875 107 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ID1P41134 155 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ATP5G3P48201 142 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATXN3-228ENST00000554592 FXYD4P59646 89 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 B2MP61769 119 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 RIGQ13278 110 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 SCGB2B2Q4G0G5 96 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
ATXN3-228ENST00000554592 FAAP20Q6NZ36 180 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 FOXI2Q6ZQN5 318 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ACOT7LQ6ZUV0 252 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 CMTM1Q8IZ96 169 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 BEST4Q8NFU0 473 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 OR4B1Q8NGF8 309 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 OR51S1Q8NGJ8 323 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 OR5H2Q8NGV7 314 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 OR4X1Q8NH49 305 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 STOML3Q8TAV4 291 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 Q8WTZ3 238 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 LINC00052Q96N35 136 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 SEC22CQ9BRL7 303 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 TMEM208Q9BTX3 173 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 PARLQ9H300 379 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 SAV1Q9H4B6 383 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-228ENST00000554592 ANAPC10Q9UM13 185 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
ATXN3-228ENST00000554592 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-228ENST00000554592 INS-IGF2F8WCM5 200 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 TAAR5O14804 337 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 BCL2L11O43521 198 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 CFDP00746 253 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-228ENST00000554592 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 FCER2P06734 321 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 OR4E1P0C645 316 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 PET100P0DJ07 73 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 HRH1P35367 487 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 H2BFSP57053 126 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-228ENST00000554592 SURF2Q15527 256 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-228ENST00000554592 ESRGQ1W209 222 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 TIGITQ495A1 244 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 H2BFWTQ7Z2G1 175 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 Q8NBF4 154 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
ATXN3-228ENST00000554592 NMES1Q9C002 83 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms