RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CDK5R1Q15078 307 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF791Q3KP31 576 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-227ENST00000554491 MRPL2Q5T653 305 aaKnown RBP3.45□□□□□ -1.86
ATXN3-227ENST00000554491 CFAP126Q5VTH2 177 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 SLC48A1Q6P1K1 146 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 TCF23Q7RTU1 214 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 AAED1Q7RTV5 226 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 LHFPL1Q86WI0 220 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 SFTPA2Q8IWL1 248 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF441Q8N8Z8 693 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 ZPLD1Q8TCW7 415 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 TMEM255BQ8WV15 326 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 PGLYRP3Q96LB9 341 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 SMR3AQ99954 134 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 AGPAT4-IT1Q9H0P7 198 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 HIGD1BQ9P298 99 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 CACNG5Q9UF02 275 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 CNTRLQ7Z7A1 2325 aa3.45□□□□□ -1.86
ATXN3-227ENST00000554491 HIVEP2P31629 2446 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 MAP1AP78559 2803 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-227ENST00000554491 INTS1Q8N201 2190 aaKnown RBP3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV18A0A075B6X5 111 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV27A0A087WT01 109 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV13-1A0A0B4J241 112 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 A0A0J9YW62 118 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 C5orf63A6NC05 138 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 FAM24AA6NFZ4 105 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 A8MWL6 223 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 EPM2AB3EWF7 344 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 IGLL5B9A064 214 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 M0R1B8 84 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 IGHG2P01859 326 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 RBP4P02753 201 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 PYYP10082 97 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 SFTPDP35247 375 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 NCBP2P52298 156 aaKnown RBP eCLIP3.44□□□□□ -1.865e-7■■■■□ 25.1
ATXN3-227ENST00000554491 TMEM187Q14656 261 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 VMA21Q3ZAQ7 101 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 PHLDA2Q53GA4 152 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 FAM201AQ5SY85 155 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 EBLN2Q6P2I7 272 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 PRSS41Q7RTY9 318 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
ATXN3-227ENST00000554491 CEND1Q8N111 149 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF645Q8N7E2 425 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TMEM99Q8N816 258 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 C15orf53Q8NAA6 179 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 FDCSPQ8NFU4 85 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 OR10AC1Q8NH08 325 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 NT5CQ8TCD5 201 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 MYOZ3Q8TDC0 251 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 PHLDA1Q8WV24 401 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-227ENST00000554491 PHPT1Q9NRX4 125 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TNFRSF19Q9NS68 423 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 GNG13Q9P2W3 67 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TAC3Q9UHF0 121 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 TMED7Q9Y3B3 224 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 DOCK7Q96N67 2140 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 HCFC1P51610 2035 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 CCDC88CQ9P219 2028 aa3.44□□□□□ -1.86
ATXN3-227ENST00000554491 SONP18583 2426 aaKnown RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 TRAV12-2A0A075B6T6 113 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 CEBPZOSA8MTT3 80 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 C17orf100A8MU93 164 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 SSSCA1O60232 199 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 NUDT14O95848 222 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 P01737 135 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 HLA-DQA1P01909 254 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 HMGN2P05204 90 aaKnown RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 FGF6P10767 208 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 FKBP2P26885 142 aaKnown RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 CSN1S1P47710 185 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 RPS18P62269 152 aaKnown RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 SRYQ05066 204 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 IGFL2Q6UWQ7 119 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 PQLC2Q6ZP29 291 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 NFE4Q86UQ8 179 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 CIARTQ8N365 385 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 OR2A1Q8NGT9 310 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 RNF128Q8TEB7 428 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 COPS9Q8WXC6 57 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 DLX4Q92988 240 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 C18orf12Q96KH6 178 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 ZNF331Q9NQX6 463 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-227ENST00000554491 IL36BQ9NZH7 164 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 Q9UF83 564 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 DOCK10Q96BY6 2186 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 VPS13CQ709C8 3753 aa3.43□□□□□ -1.86
ATXN3-227ENST00000554491 IGHV1OR21-1A0A087WYE8 117 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 SMIM26A0A096LP01 95 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 IGHV1-24A0A0C4DH33 117 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 MDFIC2A0A1B0GVS7 189 aa3.42□□□□□ -1.86
ATXN3-227ENST00000554491 A0A1W2PPK0 400 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms