RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 H3BMG7 143 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 SCGB2A2Q13296 93 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 TMEM75Q8N9X5 138 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 C8orf49Q96NF6 230 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 E9PLD3 99 aa13.3□□□□□ -0.28
PPP4R3A-202ENST00000554390 TMEM133Q9H2Q1 129 aa13.3□□□□□ -0.28
PPP4R3A-202ENST00000554390 HHLA3Q9XRX5 114 aa13.3□□□□□ -0.28
PPP4R3A-202ENST00000554390 TRBV25-1A0A075B6N4 114 aa13.3□□□□□ -0.28
PPP4R3A-202ENST00000554390 TMEM30BQ3MIR4 351 aa13.3□□□□□ -0.28
PPP4R3A-202ENST00000554390 IGLL5B9A064 214 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 C16orf97H3BN30 126 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 CKS2P33552 79 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 CEND1Q8N111 149 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 MTURNQ8N3F0 131 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 TMEM14CQ9P0S9 112 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 TRAV26-1A0A087WT03 109 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 CNIH1O95406 144 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 ZNF562Q6V9R5 426 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 AMTNQ6UX39 209 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 SIGLEC9Q9Y336 463 aa13.29□□□□□ -0.28
PPP4R3A-202ENST00000554390 ATP5G2Q06055 141 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 TM2D2Q9BX73 214 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 K7EQM0 130 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 INSL3P51460 131 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 ODF1Q14990 250 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
PPP4R3A-202ENST00000554390 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.28
PPP4R3A-202ENST00000554390 PPP1R27Q86WC6 154 aa13.27□□□□□ -0.28
PPP4R3A-202ENST00000554390 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
PPP4R3A-202ENST00000554390 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.29
PPP4R3A-202ENST00000554390 RASL11BQ9BPW5 248 aa13.27□□□□□ -0.29
PPP4R3A-202ENST00000554390 ZMAT4Q9H898 229 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGKV1-17P01599 117 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 IL4P05112 153 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 PRSS1P07477 247 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 CRYBA4P53673 196 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 Q8TAT8 98 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 NGBQ9NPG2 151 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 TEX22C9J3V5 150 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 TCTEX1D4Q5JR98 221 aa13.26□□□□□ -0.29
PPP4R3A-202ENST00000554390 AGRNO00468 2067 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGHV1-3A0A0C4DH29 117 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 E7EQL1 145 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGKCP01834 107 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 DLX6P56179 175 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 KLRD1Q13241 179 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 HLA-DMBP28068 263 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 LEPP41159 167 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 Q6ZS92 163 aa13.25□□□□□ -0.29
PPP4R3A-202ENST00000554390 TWIST1Q15672 202 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 GAGE13Q4V321 117 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 ZC2HC1BQ5TFG8 222 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 NPIPB5A8MRT5 1133 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 CEACAM4O75871 244 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 CHD8Q9HCK8 2581 aa13.24□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 SHISA9B4DS77 424 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 SH2D1AO60880 128 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 FAM57AQ8TBR7 257 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 RPEQ96AT9 228 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 MRAP2Q96G30 205 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 GAS8-AS1O95177 125 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 PPIFP30405 207 aaKnown RBP13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 HES1Q14469 280 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 EVI2AP22794 236 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 FOXC2Q99958 501 aa13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
PPP4R3A-202ENST00000554390 SPG11Q96JI7 2443 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 TIMM23O14925 209 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 PRO0461Q9UI25 63 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 C3orf36Q3SXR2 165 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 C20orf78Q9BR46 151 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 MAP1LC3AQ9H492 121 aa13.22□□□□□ -0.29
PPP4R3A-202ENST00000554390 VSTM5A8MXK1 200 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 PRRG2O14669 202 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 FCER1GP30273 86 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 MC5RP33032 325 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 TMEM8BA6NDV4 472 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.29
PPP4R3A-202ENST00000554390 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms