RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ZNF747Q9BV97 191 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 SIGLEC8Q9NYZ4 499 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 ERASQ7Z444 233 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
ACTN1-211ENST00000553882 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 ORM1P02763 201 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
ACTN1-211ENST00000553882 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 A0A096LNJ9 63 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 SNAI2O43623 268 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 ZNF207O43670 478 aaKnown RBP11.29□□□□□ -0.6
ACTN1-211ENST00000553882 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 FER1L6-AS1Q8NA97 138 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
ACTN1-211ENST00000553882 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 NUDT3O95989 172 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 TCTAP57738 103 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
ACTN1-211ENST00000553882 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.6
ACTN1-211ENST00000553882 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.6
ACTN1-211ENST00000553882 UBE2E1P51965 193 aa11.27□□□□□ -0.6
ACTN1-211ENST00000553882 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.6
ACTN1-211ENST00000553882 CKS2P33552 79 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 TMEM219Q86XT9 240 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-211ENST00000553882 CCDC140Q96MF4 163 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 LINC00527Q9UJ94 153 aa11.27□□□□□ -0.61
ACTN1-211ENST00000553882 A0A087X0K7 114 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 CCL25O15444 150 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 BUB3O43684 328 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 NPYP01303 97 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 CRYBG3Q68DQ2 2970 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 BMI1P35226 326 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 FOXE3Q13461 319 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 IL17RELQ6ZVW7 336 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 ZNF738Q8NE65 137 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 ORAOV1Q8WV07 137 aa11.26□□□□□ -0.61
ACTN1-211ENST00000553882 GAS8-AS1O95177 125 aa11.25□□□□□ -0.61
ACTN1-211ENST00000553882 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-211ENST00000553882 COX8CQ7Z4L0 72 aa11.25□□□□□ -0.61
ACTN1-211ENST00000553882 U3KQK5 164 aa11.25□□□□□ -0.61
ACTN1-211ENST00000553882 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 CIDEAO60543 219 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 IGLC6P0CF74 106 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 EFNA4P52798 201 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 LMO4P61968 165 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
ACTN1-211ENST00000553882 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 CENPVL3A0A0U1RRI6 287 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 CACNG7P62955 275 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 NHLH1Q02575 133 aa11.23□□□□□ -0.61
ACTN1-211ENST00000553882 C19orf84I3L1E1 186 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 NPFFO15130 113 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
ACTN1-211ENST00000553882 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 EVI2AP22794 236 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.613e-9■■■■■ 29.9
ACTN1-211ENST00000553882 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
ACTN1-211ENST00000553882 HBDP02042 147 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 Q6ZQT7 251 aa11.22□□□□□ -0.61
ACTN1-211ENST00000553882 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-211ENST00000553882 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.61
ACTN1-211ENST00000553882 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.61
ACTN1-211ENST00000553882 CFAP46Q8IYW2 2715 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 COX8AP10176 69 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 S100A7P31151 101 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 UBE2V1Q13404 147 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 VAMP3Q15836 100 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 C5orf56Q8N8D9 126 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 RNF185Q96GF1 192 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.62
ACTN1-211ENST00000553882 FLNCQ14315 2725 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 METTL26Q96S19 204 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 CBY3A6NI87 242 aa11.2□□□□□ -0.62
ACTN1-211ENST00000553882 TAX1BP3O14907 124 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms