RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 NDUFA4O00483 81 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 ESDP10768 282 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 HBBP68871 147 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 JOSD1Q15040 202 aaPredicted RBP11.77□□□□□ -0.52
ABCD4-218ENST00000553486 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 OR5R1Q8NH85 324 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 GTSF1Q8WW33 167 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 PGLYRP4Q96LB8 373 aa11.77□□□□□ -0.52
ABCD4-218ENST00000553486 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
ABCD4-218ENST00000553486 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
ABCD4-218ENST00000553486 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
ABCD4-218ENST00000553486 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 LCN12Q6JVE5 192 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 Q6ZS46 218 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 TP53TG3Q9ULZ0 132 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV3-66A0A0C4DH42 116 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
ABCD4-218ENST00000553486 IGHG4P01861 327 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 APOHP02749 345 aaPredicted RBP11.76□□□□□ -0.53
ABCD4-218ENST00000553486 CAMPP49913 170 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 C8orf49Q96NF6 230 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
ABCD4-218ENST00000553486 NUPR1O60356 82 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 SERF1AO75920 110 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 SRIP30626 198 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 SLAQ13239 276 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 PRR25Q96S07 402 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 ASCL2Q99929 193 aa11.75□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 FSHBP01225 129 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 PRB4P10163 310 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-218ENST00000553486 HLA-DMBP28068 263 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 CRIP1P50238 77 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 CFHR3Q02985 330 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 OR4X2Q8NGF9 303 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 KLK15Q9H2R5 256 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 CLEC5AQ9NY25 188 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-218ENST00000553486 A8MWP6 167 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 IGHV3-11P01762 117 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 FAM162BQ5T6X4 162 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 Q6AWC8 147 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-218ENST00000553486 MRPL53Q96EL3 112 aaKnown RBP11.74□□□□□ -0.53
ABCD4-218ENST00000553486 VGLL1Q99990 258 aa11.74□□□□□ -0.53
ABCD4-218ENST00000553486 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
ABCD4-218ENST00000553486 GZMBP10144 247 aa11.73□□□□□ -0.53
ABCD4-218ENST00000553486 BMI1P35226 326 aa11.73□□□□□ -0.53
ABCD4-218ENST00000553486 LINC00310P59036 64 aa11.73□□□□□ -0.53
ABCD4-218ENST00000553486 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
ABCD4-218ENST00000553486 A0A1W2PS18 150 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 RIGQ13278 110 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 CDPF1Q6NVV7 123 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 TMEM89A2RUT3 159 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 TMEM189A5PLL7 270 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 F2Z2F3 143 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 SH2D1AO60880 128 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 Q6YL49 198 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 C8orf86Q6ZUL3 223 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-218ENST00000553486 SAMD10Q9BYL1 202 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 NPFFR1Q9GZQ6 430 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 VPREB3Q9UKI3 123 aa11.72□□□□□ -0.53
ABCD4-218ENST00000553486 A0A1B0GW15 77 aa11.71□□□□□ -0.54
ABCD4-218ENST00000553486 RPS20P60866 119 aaKnown RBP11.71□□□□□ -0.54
ABCD4-218ENST00000553486 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.54
ABCD4-218ENST00000553486 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.54
ABCD4-218ENST00000553486 RNF182Q8N6D2 247 aa11.71□□□□□ -0.54
ABCD4-218ENST00000553486 BORCS7Q96B45 105 aa11.71□□□□□ -0.54
ABCD4-218ENST00000553486 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 Q8TAT8 98 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 C18orf32Q8TCD1 76 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-218ENST00000553486 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-218ENST00000553486 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 IQCJQ1A5X6 159 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 TEX29Q8N6K0 151 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 SIGLECL1Q8N7X8 197 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
ABCD4-218ENST00000553486 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
ABCD4-218ENST00000553486 PSMB8P28062 276 aa11.69□□□□□ -0.54
ABCD4-218ENST00000553486 ERCC8Q13216 396 aa11.69□□□□□ -0.54
ABCD4-218ENST00000553486 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms