RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ST6GAL2Q96JF0 529 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 CNBD2Q96M20 576 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 CHAC1Q9BUX1 264 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 DNAJC4Q9NNZ3 241 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 HHLA3Q9XRX5 114 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 KLF12Q9Y4X4 402 aa3.54□□□□□ -1.84
HOXB3-213ENST00000552000 H0Y8G0 127 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 K7EQD1 137 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 LECT2O14960 151 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 SPINK4O60575 86 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 TNFAIP8O95379 198 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 CD3DP04234 171 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 SNRPCP09234 159 aaKnown RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 IAPPP10997 89 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 S100A7P31151 101 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 LEPP41159 167 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 ATP5IP56385 69 aaPredicted RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 SLAQ13239 276 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 GPR107Q5VW38 600 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 ZNF680Q8NEM1 530 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 OR1S1Q8NH92 325 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 TERB2Q8NHR7 220 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 CIRBP-AS1Q8TBR5 109 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 ZNF431Q8TF32 576 aaPredicted RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 PCNPQ8WW12 178 aaKnown RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 DAZAP1Q96EP5 407 aaKnown RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 SHANK2-AS3Q9BTD1 123 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 VCX2Q9H322 139 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 NAA60Q9H7X0 242 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 MRPL16Q9NX20 251 aaKnown RBP3.53□□□□□ -1.84
HOXB3-213ENST00000552000 HIGD1AQ9Y241 93 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
HOXB3-213ENST00000552000 A0A087X0K7 114 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 TRGV4A0A0C4DH28 118 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IGHV3-38A0A0C4DH36 116 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 SMIM31A0A1B0GVY4 71 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 CRYM-AS1A6NIL9 109 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IBA57-AS1B1ANH7 110 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 H3BTX0 84 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 HYPMO75409 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 CCNKO75909 580 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IGHV3-30P01768 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IGHV3-33P01772 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 OR5G3P0C626 314 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 SFTA3P0C7M3 94 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IGHV3-30-3P0DP02 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 IGHV3-30-5P0DP03 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 TCL1AP56279 114 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 GABARAPL2P60520 117 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
HOXB3-213ENST00000552000 RAB11AP62491 216 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 AKR1C1Q04828 323 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 SMCO1Q147U7 214 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 LINC01556Q5JQF7 62 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 CROCCP3Q8IVE0 287 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 EIF4E3Q8N5X7 224 aaKnown RBP3.52□□□□□ -1.85
HOXB3-213ENST00000552000 OR52I2Q8NH67 350 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 BLNKQ8WV28 456 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 VGLL1Q99990 258 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 RTBDNQ9BSG5 229 aaPredicted RBP3.52□□□□□ -1.85
HOXB3-213ENST00000552000 MRPL32Q9BYC8 188 aaKnown RBP3.52□□□□□ -1.85
HOXB3-213ENST00000552000 COMMD3Q9UBI1 195 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 CACFD1Q9UGQ2 172 aa3.52□□□□□ -1.85
HOXB3-213ENST00000552000 C14orf166Q9Y224 244 aaKnown RBP3.52□□□□□ -1.85
HOXB3-213ENST00000552000 LPAP08519 4548 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 C7orf71A4D174 169 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 PMS2P5A8MQ11 134 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 K7EQM0 130 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 SLC17A3O00476 420 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 MRPS12O15235 138 aaKnown RBP3.51□□□□□ -1.85
HOXB3-213ENST00000552000 GAS8-AS1O95177 125 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 RAB3DO95716 219 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 APOA1P02647 267 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 IL5P05113 134 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 NPSP0C0P6 89 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 LINC00869P0C866 280 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 TNFSF8P32971 234 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 CCR6P51684 374 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 CD300CQ08708 224 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 BTN1A1Q13410 526 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 ACOT6Q3I5F7 207 aaPredicted RBP3.51□□□□□ -1.85
HOXB3-213ENST00000552000 LCN15Q6UWW0 184 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 ACOT7LQ6ZUV0 252 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 LYZL2Q7Z4W2 148 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 BCL7BQ9BQE9 202 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 TXNDC17Q9BRA2 123 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 TM2D2Q9BX73 214 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 ZNF331Q9NQX6 463 aaPredicted RBP3.51□□□□□ -1.85
HOXB3-213ENST00000552000 NDUFA13Q9P0J0 144 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 TP53TG3Q9ULZ0 132 aa3.51□□□□□ -1.85
HOXB3-213ENST00000552000 A0A0B4J2A0 478 aa3.5□□□□□ -1.85
HOXB3-213ENST00000552000 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
HOXB3-213ENST00000552000 RBFOX3A6NFN3 312 aa3.5□□□□□ -1.85
HOXB3-213ENST00000552000 PRSS46E5RG02 174 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms