RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 CTXND1A0A1B0GTU2 59 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 UMAD1C9J7I0 102 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 CRXO43186 299 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-225ENST00000551845 INSP01308 110 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 HBE1P02100 147 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 TPT1P13693 172 aaKnown RBP7.68□□□□□ -1.18
PTCH1-225ENST00000551845 GCHFRP30047 84 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 LEPP41159 167 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 ERCC8Q13216 396 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 EIF5AL1Q6IS14 154 aaKnown RBP7.68□□□□□ -1.18
PTCH1-225ENST00000551845 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 ODF3Q96PU9 254 aa7.68□□□□□ -1.18
PTCH1-225ENST00000551845 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
PTCH1-225ENST00000551845 TMEM189A5PLL7 270 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 RBAKDNA6NC62 111 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 DIRC3C9JPN6 131 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
PTCH1-225ENST00000551845 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
PTCH1-225ENST00000551845 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 RBMY1FQ15415 496 aaKnown RBP7.67□□□□□ -1.18
PTCH1-225ENST00000551845 RRN3P1Q2M238 152 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 ARL6IP6Q8N6S5 226 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 Q8NAQ8 132 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 STOML3Q8TAV4 291 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 SUN5Q8TC36 379 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 C20orf144Q9BQM9 153 aa7.67□□□□□ -1.18
PTCH1-225ENST00000551845 AGRNO00468 2067 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 CXorf65A6NEN9 183 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 H7BYZ3 331 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 NMBP08949 121 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 HTN1P15515 57 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 ZNF138P52744 262 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
PTCH1-225ENST00000551845 ZNF726P1Q15940 193 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 VGLL1Q99990 258 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 ZNF492Q9P255 531 aa7.66□□□□□ -1.18
PTCH1-225ENST00000551845 IGKV2-40A0A087WW87 121 aaPredicted RBP7.65□□□□□ -1.18
PTCH1-225ENST00000551845 TRBV7-9A0A0J9YWB2 115 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 A0A1B0GVG6 124 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 A0A1W2PRE2 83 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 J3KRW8 73 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 IGKV2D-40P01614 121 aaPredicted RBP7.65□□□□□ -1.18
PTCH1-225ENST00000551845 GPX1P07203 203 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 SPART-AS1P0CW21 52 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 EMP1P54849 157 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 TAS2R60P59551 318 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 ZFP69Q49AA0 526 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 DPPA3Q6W0C5 159 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 SSX7Q7RTT5 188 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 SLC51BQ86UW2 128 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 SFT2D1Q8WV19 159 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 NIPSNAP3BQ9BS92 247 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 NKX6-2Q9C056 277 aaPredicted RBP7.65□□□□□ -1.18
PTCH1-225ENST00000551845 RPH3ALQ9UNE2 315 aa7.65□□□□□ -1.18
PTCH1-225ENST00000551845 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.19
PTCH1-225ENST00000551845 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 LOC102723971A0A1B0GUV8 181 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 SERTM2A0A1B0GWG4 89 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 MAP1LC3B2A6NCE7 125 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 ZNF705GA8MUZ8 300 aaPredicted RBP7.64□□□□□ -1.19
PTCH1-225ENST00000551845 K7EQM0 130 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 CRISP2P16562 243 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
PTCH1-225ENST00000551845 FHITP49789 147 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 RAB5CP51148 216 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
PTCH1-225ENST00000551845 NANOS2P60321 138 aaKnown RBP7.64□□□□□ -1.19
PTCH1-225ENST00000551845 PMS2P11Q13670 270 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 KIR3DS1Q14943 382 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 CCDC28AQ8IWP9 274 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 FAM213BQ8TBF2 198 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 TMED6Q8WW62 240 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 MBD3L1Q8WWY6 194 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 FAM19A4Q96LR4 140 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 MAP1LC3BQ9GZQ8 125 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 TMPRSS5Q9H3S3 457 aa7.64□□□□□ -1.19
PTCH1-225ENST00000551845 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 KLLNB2CW77 178 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 H2AFB1P0C5Y9 115 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 CD300CQ08708 224 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 GFI1BQ5VTD9 330 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 STARD9Q9P2P6 4700 aa7.63□□□□□ -1.19
PTCH1-225ENST00000551845 TEX48A0A1B0GUV7 120 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 C7orf71A4D174 169 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 NUPR2A6NF83 97 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 C11orf94C9JXX5 98 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 IFNA7P01567 189 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 TCRAP04437 139 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 PRM2P04554 102 aa7.62□□□□□ -1.19
PTCH1-225ENST00000551845 AZU1P20160 251 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms