RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ASB16-AS1Q495Z4 193 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 HSP90B2PQ58FF3 399 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 NMSQ5H8A3 153 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 IDNKQ5T6J7 187 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 AADACL3Q5VUY0 350 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ETFRF1Q6IPR1 90 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 STEAP1BQ6NZ63 245 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 KRTAP26-1Q6PEX3 210 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ACOT7LQ6ZUV0 252 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 Q6ZVH6 145 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 H2BFWTQ7Z2G1 175 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 DAZ4Q86SG3 579 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 OR8I2Q8N0Y5 310 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 EIF4E3Q8N5X7 224 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 RNF182Q8N6D2 247 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 BPIFB6Q8NFQ5 453 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF431Q8TF32 576 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PCNPQ8WW12 178 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ANP32BQ92688 251 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ZC2HC1AQ96GY0 325 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 CENPNQ96H22 339 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 SLC35E1Q96K37 410 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 TRGV9Q99603 122 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 SLC5A7Q9GZV3 580 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 GTSF1LQ9H1H1 148 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 AMBNQ9NP70 447 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF331Q9NQX6 463 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 DAZ3Q9NR90 486 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PSORS1C1Q9UIG5 152 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 A0A075B6Q4 140 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGKV1OR2-108A0A075B7D4 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 TRAV4A0A0B4J268 109 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 TRGV4A0A0C4DH28 118 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 TRBV7-9A0A0J9YWB2 115 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 LINC00854A0A1B0GVQ3 168 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 METTL21EPA6NDL7 271 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 FABP12A6NFH5 140 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 E5RGE8 158 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 MRPS12O15235 138 aaKnown RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ARL6IP5O75915 188 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGKV1-5P01602 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-33P01772 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 FABP1P07148 127 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CHTF8P0CG12 524 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-30-3P0DP02 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 PTHLHP12272 177 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 MYL12AP19105 171 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 HRH1P35367 487 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 RPL13AP40429 203 aaKnown RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 PPT1P50897 306 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CCR6P51684 374 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ATP5IP56385 69 aaPredicted RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SPCS3P61009 180 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CACNG7P62955 275 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SRPXP78539 464 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 Q0VG73 95 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 PNRC1Q12796 327 aaPredicted RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 FLOT2Q14254 428 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CDNFQ49AH0 187 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 OR10J3Q5JRS4 329 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 GPR107Q5VW38 600 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM91Q6ZNR0 172 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CCDC190Q86UF4 302 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 NIT1Q86X76 327 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 HOGA1Q86XE5 327 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ARL6IP6Q8N6S5 226 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SLC35G3Q8N808 338 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ZNF738Q8NE65 137 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 BEST4Q8NFU0 473 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 OR10P1Q8NGE3 313 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 OR5AP2Q8NGF4 316 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 OR5H2Q8NGV7 314 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 RPUSD4Q96CM3 377 aaKnown RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CCDC124Q96CT7 223 aaKnown RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 C2orf50Q96LR7 162 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SOSTQ9BQB4 213 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 SPXQ9BT56 116 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 RSG1Q9BU20 258 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 PLGRKTQ9HBL7 147 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 C8orf4Q9NR00 106 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 DIABLOQ9NR28 239 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 CACFD1Q9UGQ2 172 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ELF5Q9UKW6 265 aaPredicted RBP1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ANAPC10Q9UM13 185 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 ARL2BPQ9Y2Y0 163 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 TMEM56-RWDD3S4R434 201 aa1.33□□□□□ -2.2
PTCH1-223ENST00000551623 IGHV3-64A0A075B6Q5 118 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 A0A0A6YYH2 397 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 TRAV1-2A0A0B4J238 106 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 TRAV12-3A0A0B4J271 114 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 LOC100131303A0A0U1RQF7 123 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 C7orf71A4D174 169 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 A6NJ64 397 aa1.32□□□□□ -2.2
PTCH1-223ENST00000551623 IFITM5A6NNB3 132 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms