RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PEX7O00628 323 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 CREBL2O60519 120 aaPredicted RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 ARL6IP5O75915 188 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 CDS2O95674 445 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 DNAH10OSP0CZ25 163 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 CD36P16671 472 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 RAB3BP20337 219 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 PSMA1P25786 263 aaKnown RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 SDC2P34741 201 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 AQP4P55087 323 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00315P59091 139 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 SUPT4H1P63272 117 aaKnown RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 CLINT1Q14677 625 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 MRPL23Q16540 153 aaKnown RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 C22orf42Q6IC83 251 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 SFXN4Q6P4A7 337 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 PATE2Q6UY27 113 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 FOXI2Q6ZQN5 318 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 Q6ZQT7 251 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 C8orf59Q8N0T1 100 aaPredicted RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 HSD17B11Q8NBQ5 300 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 OR11H7Q8NGC8 314 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 OR52E5Q8NH55 327 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 OR51H1Q8NH63 302 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 LGALS14Q8TCE9 139 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 RXFP4Q8TDU9 374 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM230Q96A57 120 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 GPR146Q96CH1 333 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 RTBDNQ9BSG5 229 aaPredicted RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 MND1Q9BWT6 205 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 COMMD5Q9GZQ3 224 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 OR51M1Q9H341 326 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 GEMIN7Q9H840 131 aaKnown RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 C8orf4Q9NR00 106 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 RHBDL2Q9NX52 303 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 PRNDQ9UKY0 176 aa1.5□□□□□ -2.17
CPSF6-207ENST00000551516 MRPS16Q9Y3D3 137 aaKnown RBP1.5□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00854A0A1B0GVQ3 168 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 SERTM2A0A1B0GWG4 89 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 LYRM9A8MSI8 78 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF705GA8MUZ8 300 aaPredicted RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 GPR31O00270 319 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 MYL12BO14950 172 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF861PO60384 105 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF324O75467 553 aaPredicted RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 RAB3DO95716 219 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TSPAN13O95857 204 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 DHFRP00374 187 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 C1QBP02746 253 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 SMR3BP02814 79 aaPredicted RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 DEFA4P12838 97 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 CXCL3P19876 107 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 NPPCP23582 126 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 HRH1P35367 487 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ETV6P41212 452 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 CDKN1BP46527 198 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 NMUP48645 174 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 HSPA13P48723 471 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 FGF8P55075 233 aaPredicted RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 NUTF2P61970 127 aaKnown RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 HAMPP81172 84 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF90Q03938 601 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TRAM1Q15629 374 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM183BQ1AE95 376 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 PSMG4Q5JS54 123 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 C1orf194Q5T5A4 169 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 FAM78BQ5VT40 261 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 SSX7Q7RTT5 188 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM183AQ8IXX5 376 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 C15orf53Q8NAA6 179 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 OR13C8Q8NGS7 320 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 YIPF6Q96EC8 236 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 IGF2BP2-AS1Q96M15 143 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM56Q96MV1 263 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 GINS4Q9BRT9 223 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF2Q9BSG1 426 aaPredicted RBP1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM70Q9BUB7 260 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 ATG5Q9H1Y0 275 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 HRASLSQ9HDD0 168 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 RFNGQ9Y644 331 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM56-RWDD3S4R434 201 aa1.49□□□□□ -2.17
CPSF6-207ENST00000551516 MEIS3P1A6NDR6 274 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 K7EPK0 472 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 M0R2Z0 102 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ISLRO14498 428 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 GNG7O60262 68 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 PMP2P02689 132 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 EIF4EP06730 217 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00694P0DN24 101 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 RPS10P46783 165 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 PSMB3P49720 205 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 RND2P52198 227 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 FXYD7P58549 80 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TAS2R20P59543 309 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SPCS3P61009 180 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 MRPS15P82914 257 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 PSG9Q00887 426 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 REG3AQ06141 175 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SP6Q3SY56 376 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms