RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ATP5SQ99766 215 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 MBD2Q9UBB5 411 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 TIMM8BQ9Y5J9 83 aaPredicted RBP9.12□□□□□ -0.95
NPAS3-209ENST00000551008 IGLV2-18A0A075B6J9 118 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 CBY3A6NI87 242 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 SSNA1O43805 119 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
NPAS3-209ENST00000551008 OR10J4P0C629 311 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 NBEAP1P0C6P0 100 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 LEPP41159 167 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 DEFA1P59665 94 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 DEFA3P59666 94 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 BTN1A1Q13410 526 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 ICAM4Q14773 271 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 LGALS9BQ3B8N2 356 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 VGLL1Q99990 258 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 SMIM3Q9BZL3 60 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 PRELID1Q9Y255 219 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 ALG5Q9Y673 324 aa9.11□□□□□ -0.95
NPAS3-209ENST00000551008 C7orf71A4D174 169 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 ATP5G1P05496 136 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 CRISP2P16562 243 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 HOXA5P20719 270 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 ATP5G3P48201 142 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 RNF212Q495C1 297 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 C15orf53Q8NAA6 179 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 MRPL32Q9BYC8 188 aaKnown RBP9.1□□□□□ -0.95
NPAS3-209ENST00000551008 OR51M1Q9H341 326 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 TIMM9Q9Y5J7 89 aa9.1□□□□□ -0.95
NPAS3-209ENST00000551008 KIAA1109Q2LD37 5005 aa9.09□□□□□ -0.95
NPAS3-209ENST00000551008 F5H768 121 aa9.09□□□□□ -0.95
NPAS3-209ENST00000551008 SLC25A5P05141 298 aaKnown RBP9.09□□□□□ -0.95
NPAS3-209ENST00000551008 RPL12P30050 165 aaKnown RBP9.09□□□□□ -0.95
NPAS3-209ENST00000551008 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
NPAS3-209ENST00000551008 PAXXQ9BUH6 204 aa9.09□□□□□ -0.95
NPAS3-209ENST00000551008 FFAR4Q5NUL3 377 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 Q6ZTI0 123 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 UBE2DNLQ8IWF7 75 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 Q8TAT8 98 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 KCNIP2Q9NS61 270 aa9.08□□□□□ -0.96
NPAS3-209ENST00000551008 GAGE12BA1L429 117 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 GAGE7O76087 117 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
NPAS3-209ENST00000551008 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 GSN-AS1Q9NRJ2 163 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 TP53TG3Q9ULZ0 132 aa9.07□□□□□ -0.96
NPAS3-209ENST00000551008 C17orf112F2Z3M2 114 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 OR7C2O60412 319 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 PET100P0DJ07 73 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 RNASE4P34096 147 aaKnown RBP9.06□□□□□ -0.96
NPAS3-209ENST00000551008 Q5BKY6 102 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 CCDC28AQ8IWP9 274 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 Q9H3A6 140 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 LINC00588Q9Y4M8 146 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 KLF12Q9Y4X4 402 aa9.06□□□□□ -0.96
NPAS3-209ENST00000551008 NUDT3O95989 172 aa9.05□□□□□ -0.96
NPAS3-209ENST00000551008 PTTG1O95997 202 aa9.05□□□□□ -0.96
NPAS3-209ENST00000551008 NMBP08949 121 aa9.05□□□□□ -0.96
NPAS3-209ENST00000551008 RAB2AP61019 212 aa9.05□□□□□ -0.96
NPAS3-209ENST00000551008 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
NPAS3-209ENST00000551008 UBE2L3P68036 154 aaKnown RBP9.05□□□□□ -0.96
NPAS3-209ENST00000551008 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
NPAS3-209ENST00000551008 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 PRSS29PA6NIE9 313 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 SNURFLB1AK76 121 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 ZNF138P52744 262 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 TCL1AP56279 114 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 FAM3BP58499 235 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-209ENST00000551008 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
NPAS3-209ENST00000551008 VSIG2Q96IQ7 327 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 C18orf15Q96N68 181 aa9.04□□□□□ -0.96
NPAS3-209ENST00000551008 A0A0J9YY99 117 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 DIRC3C9JPN6 131 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 SPINK4O60575 86 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 IFNA5P01569 189 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 GPX1P07203 203 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 M6PRP20645 277 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 TMEM78Q5T7P6 136 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 SCGB1C1Q8TD33 95 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
NPAS3-209ENST00000551008 TRBV7-9A0A0J9YWB2 115 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms