RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TVP23CQ96ET8 276 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 FAM19A4Q96LR4 140 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 SGK494Q96LW2 274 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 TRAV34A0A0B4J273 112 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 DUSP14O95147 198 aaKnown RBP9.87□□□□□ -0.83
ERBB3-215ENST00000550828 CSN1S1P47710 185 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 CLLU1Q5K131 121 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 C2CD4CQ8TF44 421 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 C11orf52Q96A22 123 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 ATG101Q9BSB4 218 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 COL7A1Q02388 2944 aa9.87□□□□□ -0.83
ERBB3-215ENST00000550828 RBFOX3A6NFN3 312 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 M0R2Z0 102 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
ERBB3-215ENST00000550828 MEF2BQ02080 365 aaPredicted RBP9.86□□□□□ -0.83
ERBB3-215ENST00000550828 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 TOR2AQ5JU69 321 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 PRR9Q5T870 116 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 CYB561D1Q8N8Q1 229 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 FAM210AQ96ND0 272 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 NKX6-2Q9C056 277 aaPredicted RBP9.86□□□□□ -0.83
ERBB3-215ENST00000550828 VAX2Q9UIW0 290 aa9.86□□□□□ -0.83
ERBB3-215ENST00000550828 KIR2DL5BA0A0G2JN68 375 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 KIR2DL5BA0A0G2JPC4 375 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 C9JQL5 133 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 IFNA1P01562 189 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
ERBB3-215ENST00000550828 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
ERBB3-215ENST00000550828 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
ERBB3-215ENST00000550828 KIR2DL5AQ8N109 375 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 KIR2DL5BQ8NHK3 375 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 CSTL1Q9H114 145 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 RETNQ9HD89 108 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 ZNF492Q9P255 531 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 KLF12Q9Y4X4 402 aa9.85□□□□□ -0.83
ERBB3-215ENST00000550828 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
ERBB3-215ENST00000550828 ZNF138P52744 262 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 Q6ZQT7 251 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 Q86TA4 180 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 TMEM75Q8N9X5 138 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 HIST1H2BAQ96A08 127 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 TCEAL7Q9BRU2 100 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 XCL2Q9UBD3 114 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 PSG8Q9UQ74 426 aa9.84□□□□□ -0.83
ERBB3-215ENST00000550828 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 SERTM2A0A1B0GWG4 89 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 CRISP2P16562 243 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 APOC4P55056 127 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
ERBB3-215ENST00000550828 TMEM78Q5T7P6 136 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
ERBB3-215ENST00000550828 PPP1R14DQ9NXH3 145 aa9.83□□□□□ -0.84
ERBB3-215ENST00000550828 KLLNB2CW77 178 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 J3KRW8 73 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 TAGLN2P37802 199 aaKnown RBP9.82□□□□□ -0.84
ERBB3-215ENST00000550828 AKR1C3P42330 323 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 RAB14P61106 215 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 BTN1A1Q13410 526 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 PRNTQ86SH4 94 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 C8orf49Q96NF6 230 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
ERBB3-215ENST00000550828 TRBV20OR9-2A0A075B6H5 130 aa9.81□□□□□ -0.84
ERBB3-215ENST00000550828 TRBV6-1A0A0K0K1D8 114 aa9.81□□□□□ -0.84
ERBB3-215ENST00000550828 F6UZH7 168 aa9.81□□□□□ -0.84
ERBB3-215ENST00000550828 SRP19P09132 144 aaKnown RBP9.81□□□□□ -0.84
ERBB3-215ENST00000550828 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
ERBB3-215ENST00000550828 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
ERBB3-215ENST00000550828 EIF5A2Q9GZV4 153 aaKnown RBP9.81□□□□□ -0.84
ERBB3-215ENST00000550828 RAB19A4D1S5 217 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 PDE6DO43924 150 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 LEPP41159 167 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 RPL35P42766 123 aaKnown RBP9.8□□□□□ -0.84
ERBB3-215ENST00000550828 CDKN1BP46527 198 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
ERBB3-215ENST00000550828 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 OVOL2Q9BRP0 275 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
ERBB3-215ENST00000550828 TRBV7-9A0A0J9YWB2 115 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 K7EQM0 130 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 UBE2CO00762 179 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 LTAP01374 205 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 IGLV2-8P01709 118 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 AMBPP02760 352 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 PRM2P04554 102 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 Q6ZWC4 215 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms