RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TMEM14CQ9P0S9 112 aa15.91■□□□□ 0.14
SMARCD1-209ENST00000550477 ICOSQ9Y6W8 199 aa15.91■□□□□ 0.14
SMARCD1-209ENST00000550477 ABCA13Q86UQ4 5058 aa15.91■□□□□ 0.14
SMARCD1-209ENST00000550477 RGS13O14921 159 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 PAX4O43316 350 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 IL7P13232 177 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 RNASE4P34096 147 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 VWC2Q2TAL6 325 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 VSIG2Q96IQ7 327 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 PGPEP1Q9NXJ5 209 aa15.9■□□□□ 0.14
SMARCD1-209ENST00000550477 UBE2L5PA0A1B0GUS4 154 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 KLLNB2CW77 178 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 NMBP08949 121 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 LINC00315P59091 139 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 KRTAP10-2P60368 255 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 ERCC8Q13216 396 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 TMEM78Q5T7P6 136 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 C11orf72Q8NBR9 251 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 CHAC2Q8WUX2 184 aa15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 RBM38Q9H0Z9 239 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-209ENST00000550477 M0R3E3 92 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 LYRM1O43325 122 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 ZNF324O75467 553 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 TCRBP04435 133 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 S100A10P60903 97 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 IBA57Q5T440 356 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 SDHCQ99643 169 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 ARPC5LQ9BPX5 153 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 AGPAT4-IT1Q9H0P7 198 aa15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 LYRM2Q9NU23 88 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-209ENST00000550477 TRAV9-2A0A087WT02 112 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 FGF7P21781 194 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 TCL1AP56279 114 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 BLNKQ8WV28 456 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 ST6GAL2Q96JF0 529 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 GPN1Q9HCN4 374 aaPredicted RBP15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 PRO0255Q9UI72 69 aa15.87■□□□□ 0.13
SMARCD1-209ENST00000550477 LRP1BQ9NZR2 4599 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 SPINK4O60575 86 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 CRISP2P16562 243 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 ERVFC1-1P60608 527 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 CD300CQ08708 224 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 BTN1A1Q13410 526 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 C9orf47Q6ZRZ4 202 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 NFE4Q86UQ8 179 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 TMEM252Q8N6L7 170 aa15.86■□□□□ 0.13
SMARCD1-209ENST00000550477 TRAV6A0A075B6T7 132 aa15.85■□□□□ 0.13
SMARCD1-209ENST00000550477 MRPL23Q16540 153 aaKnown RBP15.85■□□□□ 0.13
SMARCD1-209ENST00000550477 FAM19A4Q96LR4 140 aa15.85■□□□□ 0.13
SMARCD1-209ENST00000550477 KLF12Q9Y4X4 402 aa15.85■□□□□ 0.13
SMARCD1-209ENST00000550477 NXPH4O95158 308 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 NDUFB4O95168 129 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 ICAM4Q14773 271 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 CDPF1Q6NVV7 123 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 EXOC3-AS1Q8N2X6 119 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 HHLA3Q9XRX5 114 aa15.84■□□□□ 0.13
SMARCD1-209ENST00000550477 IGHV1OR15-1A0A075B7D0 117 aa15.83■□□□□ 0.12
SMARCD1-209ENST00000550477 EPM2AB3EWF7 344 aa15.83■□□□□ 0.12
SMARCD1-209ENST00000550477 PYYP10082 97 aa15.83■□□□□ 0.12
SMARCD1-209ENST00000550477 SEC22CQ9BRL7 303 aa15.83■□□□□ 0.12
SMARCD1-209ENST00000550477 NUDT15Q9NV35 164 aa15.83■□□□□ 0.12
SMARCD1-209ENST00000550477 PLA2G10O15496 165 aa15.82■□□□□ 0.12
SMARCD1-209ENST00000550477 RAB32Q13637 225 aa15.82■□□□□ 0.12
SMARCD1-209ENST00000550477 FAM122CQ6P4D5 195 aa15.82■□□□□ 0.12
SMARCD1-209ENST00000550477 NPCDR1Q9BY65 106 aa15.82■□□□□ 0.12
SMARCD1-209ENST00000550477 C11orf1Q9H5F2 150 aa15.82■□□□□ 0.12
SMARCD1-209ENST00000550477 IGSF23A1L1A6 192 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 IFNA5P01569 189 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 IGHV3-53P01767 116 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 NBEAP1P0C6P0 100 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 CSN1S1P47710 185 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 ZNF415Q09FC8 603 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 NEGR1Q7Z3B1 354 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 VGLL1Q99990 258 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 KCNIP2Q9NS61 270 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 ZNF492Q9P255 531 aa15.81■□□□□ 0.12
SMARCD1-209ENST00000550477 TRBV7-9A0A0J9YWB2 115 aa15.8■□□□□ 0.12
SMARCD1-209ENST00000550477 K7EP13 123 aa15.8■□□□□ 0.12
SMARCD1-209ENST00000550477 H2AFB2P0C5Z0 115 aa15.8■□□□□ 0.12
SMARCD1-209ENST00000550477 OR51M1Q9H341 326 aa15.8■□□□□ 0.12
SMARCD1-209ENST00000550477 MRPL16Q9NX20 251 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-209ENST00000550477 IGKV2-40A0A087WW87 121 aaPredicted RBP15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 TRGV4A0A0C4DH28 118 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 IGKV2D-40P01614 121 aaPredicted RBP15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 ZNF138P52744 262 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 CRYBA4P53673 196 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 LYPD5Q6UWN5 251 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 Q6ZRN7 208 aaPredicted RBP15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 ZFAND2AQ8N6M9 145 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 PCNPQ8WW12 178 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 SLC25A31Q9H0C2 315 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 LY96Q9Y6Y9 160 aa15.79■□□□□ 0.12
SMARCD1-209ENST00000550477 PRAF2O60831 178 aa15.78■□□□□ 0.12
SMARCD1-209ENST00000550477 C8orf49Q96NF6 230 aa15.78■□□□□ 0.12
SMARCD1-209ENST00000550477 SLC25A2Q9BXI2 301 aa15.78■□□□□ 0.12
SMARCD1-209ENST00000550477 MRPL32Q9BYC8 188 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-209ENST00000550477 TP53TG3Q9ULZ0 132 aa15.78■□□□□ 0.12
SMARCD1-209ENST00000550477 FAM240BA0A1B0GVZ2 78 aa15.77■□□□□ 0.12
SMARCD1-209ENST00000550477 SRIP30626 198 aa15.77■□□□□ 0.12
SMARCD1-209ENST00000550477 PAXXQ9BUH6 204 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms