RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ID1P41134 155 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 FOXE3Q13461 319 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 Q6ZN92 141 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 OR4X2Q8NGF9 303 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
TMEM116-209ENST00000550020 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
TMEM116-209ENST00000550020 BEX4Q9NWD9 120 aaPredicted RBP6.87□□□□□ -1.31
TMEM116-209ENST00000550020 UFC1Q9Y3C8 167 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 MRPS16Q9Y3D3 137 aaKnown RBP6.87□□□□□ -1.31
TMEM116-209ENST00000550020 SPTA1P02549 2419 aa6.87□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3-66A0A0C4DH42 116 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 A0A1B0GV90 55 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 CSN3P07498 182 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 HLA-DMBP28068 263 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
TMEM116-209ENST00000550020 NUTF2P61970 127 aaKnown RBP6.86□□□□□ -1.31
TMEM116-209ENST00000550020 LOXL1Q08397 574 aaPredicted RBP6.86□□□□□ -1.31
TMEM116-209ENST00000550020 ERCC8Q13216 396 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
TMEM116-209ENST00000550020 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 IGFL4Q6B9Z1 124 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 IL17RELQ6ZVW7 336 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 RNF182Q8N6D2 247 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 PMCHL2Q9BQD1 86 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 PEF1Q9UBV8 284 aaKnown RBP6.86□□□□□ -1.31
TMEM116-209ENST00000550020 CFAP47Q6ZTR5 3102 aa6.86□□□□□ -1.31
TMEM116-209ENST00000550020 TRAV21A0A0B4J279 112 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 TMEM213A2RRL7 107 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 PRAC2D3DTV9 90 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 EREGO14944 169 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 ZNF207O43670 478 aaKnown RBP6.85□□□□□ -1.31
TMEM116-209ENST00000550020 TCF21O43680 179 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 HBDP02042 147 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 GPHB5Q86YW7 130 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 LRRC75A-AS1Q8N1F1 130 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
TMEM116-209ENST00000550020 SPTBN2O15020 2390 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 RPL11P62913 178 aaKnown RBP6.84□□□□□ -1.31
TMEM116-209ENST00000550020 CFHR3Q02985 330 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 LINC01545Q5VT33 79 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 DPF1Q92782 380 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 SIGLEC8Q9NYZ4 499 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 SMPXQ9UHP9 88 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 LINC00527Q9UJ94 153 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 BOD1L1Q8NFC6 3051 aa6.84□□□□□ -1.31
TMEM116-209ENST00000550020 IGF2RP11717 2491 aa6.84□□□□□ -1.32
TMEM116-209ENST00000550020 PLXNB1O43157 2135 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 M0QZ24 198 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 TCAPO15273 167 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 SNAI2O43623 268 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 PPP1R17O96001 155 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 TGFAP01135 160 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 ELANEP08246 267 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
TMEM116-209ENST00000550020 ASIPP42127 132 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 BLCAPP62952 87 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 SPANXN1Q5VSR9 72 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 Q71RC1 249 aaPredicted RBP6.83□□□□□ -1.32
TMEM116-209ENST00000550020 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 RHPN1-AS1Q9BWJ2 59 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 VPREB3Q9UKI3 123 aa6.83□□□□□ -1.32
TMEM116-209ENST00000550020 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 LOC389332A0A1B0GUA5 103 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 SOCS3O14543 225 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 IGLL1P15814 213 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 TSPOP30536 169 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 DEFB112Q30KQ8 113 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 UNQ9165/PRO28630Q6UXU0 137 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 DEFB125Q8N687 156 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 OR1N2Q8NGR9 330 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 PSMG3-AS1Q96PY0 264 aa6.82□□□□□ -1.32
TMEM116-209ENST00000550020 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
TMEM116-209ENST00000550020 K7EMI3 77 aa6.81□□□□□ -1.32
TMEM116-209ENST00000550020 SMAD7O15105 426 aaKnown RBP6.81□□□□□ -1.32
TMEM116-209ENST00000550020 TNFRSF6BO95407 300 aa6.81□□□□□ -1.32
TMEM116-209ENST00000550020 NPYP01303 97 aa6.81□□□□□ -1.32
TMEM116-209ENST00000550020 S100A4P26447 101 aaKnown RBP6.81□□□□□ -1.32
TMEM116-209ENST00000550020 G0S2P27469 103 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms