RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
COX6A1-203ENST00000550009 NMES1Q9C002 83 aa11.08□□□□□ -0.64
COX6A1-203ENST00000550009 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
COX6A1-203ENST00000550009 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
COX6A1-203ENST00000550009 APOBP04114 4563 aaKnown RBP11.08□□□□□ -0.64
COX6A1-203ENST00000550009 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 ZNF324O75467 553 aaPredicted RBP11.07□□□□□ -0.64
COX6A1-203ENST00000550009 TNP2Q05952 138 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 OR5I1Q13606 314 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 GUK1Q16774 197 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 LINC00299Q6ZSB3 139 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 ATG101Q9BSB4 218 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 SMIM3Q9BZL3 60 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 RNF24Q9Y225 148 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
COX6A1-203ENST00000550009 E5RGE8 158 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 ZNF253O75346 499 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 RNASE4P34096 147 aaKnown RBP11.06□□□□□ -0.64
COX6A1-203ENST00000550009 LEPP41159 167 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 Q8TAT8 98 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 PPP1R1CQ8WVI7 109 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 WDR61Q9GZS3 305 aaKnown RBP11.06□□□□□ -0.64
COX6A1-203ENST00000550009 GSN-AS1Q9NRJ2 163 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
COX6A1-203ENST00000550009 C7orf71A4D174 169 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 KLLNB2CW77 178 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 ZFAND2AQ8N6M9 145 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 MARVELD1Q9BSK0 173 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 PTTG2Q9NZH5 202 aa11.05□□□□□ -0.64
COX6A1-203ENST00000550009 MPDU1O75352 247 aa11.04□□□□□ -0.64
COX6A1-203ENST00000550009 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
COX6A1-203ENST00000550009 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
COX6A1-203ENST00000550009 MRPL53Q96EL3 112 aaKnown RBP11.04□□□□□ -0.64
COX6A1-203ENST00000550009 NBDYA0A0U1RRE5 68 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 MPC2O95563 127 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 RLN2P04090 185 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 SLC25A5P05141 298 aaKnown RBP11.03□□□□□ -0.64
COX6A1-203ENST00000550009 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 ESRGQ1W209 222 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 PYGO2Q9BRQ0 406 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 PAXXQ9BUH6 204 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 SLC25A31Q9H0C2 315 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
COX6A1-203ENST00000550009 PDE6HQ13956 83 aa11.02□□□□□ -0.65
COX6A1-203ENST00000550009 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
COX6A1-203ENST00000550009 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
COX6A1-203ENST00000550009 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
COX6A1-203ENST00000550009 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
COX6A1-203ENST00000550009 HSPB11Q9Y547 144 aa11.02□□□□□ -0.65
COX6A1-203ENST00000550009 PRAF2O60831 178 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 CRISP2P16562 243 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 FFAR4Q5NUL3 377 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 RXFP4Q8TDU9 374 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 ATP5SQ99766 215 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
COX6A1-203ENST00000550009 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
COX6A1-203ENST00000550009 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
COX6A1-203ENST00000550009 SSNA1O43805 119 aa11□□□□□ -0.65
COX6A1-203ENST00000550009 OR7C2O60412 319 aa11□□□□□ -0.65
COX6A1-203ENST00000550009 GPX1P07203 203 aa11□□□□□ -0.65
COX6A1-203ENST00000550009 M6PRP20645 277 aa11□□□□□ -0.65
COX6A1-203ENST00000550009 RANP62826 216 aaKnown RBP11□□□□□ -0.65
COX6A1-203ENST00000550009 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
COX6A1-203ENST00000550009 A0A096LPF7 62 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 RPL12P30050 165 aaKnown RBP10.99□□□□□ -0.65
COX6A1-203ENST00000550009 CCL18P55774 89 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 MUC21Q5SSG8 566 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
COX6A1-203ENST00000550009 Q9H3A6 140 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 Q9H8V8 135 aa10.99□□□□□ -0.65
COX6A1-203ENST00000550009 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
COX6A1-203ENST00000550009 SPINK4O60575 86 aa10.98□□□□□ -0.65
COX6A1-203ENST00000550009 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
COX6A1-203ENST00000550009 ANXA2RQ3ZCQ2 193 aa10.98□□□□□ -0.65
COX6A1-203ENST00000550009 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
COX6A1-203ENST00000550009 C6orf223Q8N319 242 aa10.98□□□□□ -0.65
COX6A1-203ENST00000550009 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
COX6A1-203ENST00000550009 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
COX6A1-203ENST00000550009 MED14OSP0DP75 135 aa10.97□□□□□ -0.65
COX6A1-203ENST00000550009 ZNF138P52744 262 aa10.97□□□□□ -0.65
COX6A1-203ENST00000550009 TCL1AP56279 114 aa10.97□□□□□ -0.65
COX6A1-203ENST00000550009 RAB2AP61019 212 aa10.97□□□□□ -0.65
COX6A1-203ENST00000550009 UBE2L3P68036 154 aaKnown RBP10.97□□□□□ -0.65
COX6A1-203ENST00000550009 CYCSP99999 105 aaKnown RBP10.97□□□□□ -0.65
COX6A1-203ENST00000550009 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms