RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 TRAV8-1A0A0A6YYK1 113 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 C11orf94C9JXX5 98 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 IFNA1P01562 189 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 NMBP08949 121 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 PMS2P11Q13670 270 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 SGK494Q96LW2 274 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 LINC00477Q96M19 166 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 ATG101Q9BSB4 218 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 XCL2Q9UBD3 114 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 NBEAL2Q6ZNJ1 2754 aa15.5■□□□□ 0.07
VPS29-206ENST00000549578 PEX7O00628 323 aa15.49■□□□□ 0.07
VPS29-206ENST00000549578 BCL2P10415 239 aa15.49■□□□□ 0.07
VPS29-206ENST00000549578 DEFB135Q30KP9 77 aa15.49■□□□□ 0.07
VPS29-206ENST00000549578 CYB561D1Q8N8Q1 229 aa15.49■□□□□ 0.07
VPS29-206ENST00000549578 UBE2CO00762 179 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 LINC00479Q96M42 142 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 RETNQ9HD89 108 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 DNAH9Q9NYC9 4486 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 SERTM2A0A1B0GWG4 89 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 ZNF138P52744 262 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 ZNF767PQ75MW2 155 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 HIST1H2BAQ96A08 127 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 ZNF492Q9P255 531 aa15.48■□□□□ 0.07
VPS29-206ENST00000549578 TRAV12-2A0A075B6T6 113 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 SCO2A0A1W2PP80 73 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 J3KRW8 73 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 K7EQM0 130 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 MEF2BQ02080 365 aaPredicted RBP15.47■□□□□ 0.07
VPS29-206ENST00000549578 KIR3DS1Q14943 382 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 ODF3Q96PU9 254 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 RARRES2Q99969 163 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 TCEAL7Q9BRU2 100 aa15.47■□□□□ 0.07
VPS29-206ENST00000549578 TRAV34A0A0B4J273 112 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 LOC102723971A0A1B0GUV8 181 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 CDKN1BP46527 198 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 Q6ZWC4 215 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 FAM19A4Q96LR4 140 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 TM2D3Q9BRN9 247 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 C1QTNF4Q9BXJ3 329 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 VAX2Q9UIW0 290 aa15.46■□□□□ 0.07
VPS29-206ENST00000549578 F6UZH7 168 aa15.45■□□□□ 0.06
VPS29-206ENST00000549578 CRXO43186 299 aaPredicted RBP15.45■□□□□ 0.06
VPS29-206ENST00000549578 IGLV2-11P01706 119 aa15.45■□□□□ 0.06
VPS29-206ENST00000549578 TMEM75Q8N9X5 138 aa15.45■□□□□ 0.06
VPS29-206ENST00000549578 CSNK1G2-AS1Q8NCQ2 148 aa15.45■□□□□ 0.06
VPS29-206ENST00000549578 RBFOX3A6NFN3 312 aa15.44■□□□□ 0.06
VPS29-206ENST00000549578 TSPOP30536 169 aa15.44■□□□□ 0.06
VPS29-206ENST00000549578 LEPP41159 167 aa15.44■□□□□ 0.06
VPS29-206ENST00000549578 TXNDC17Q9BRA2 123 aa15.44■□□□□ 0.06
VPS29-206ENST00000549578 PSG8Q9UQ74 426 aa15.44■□□□□ 0.06
VPS29-206ENST00000549578 AMBPP02760 352 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 TAGLN2P37802 199 aaKnown RBP15.43■□□□□ 0.06
VPS29-206ENST00000549578 RAB14P61106 215 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 FLI1Q01543 452 aaPredicted RBP15.43■□□□□ 0.06
VPS29-206ENST00000549578 TOR2AQ5JU69 321 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 PRNTQ86SH4 94 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 RCHY1Q96PM5 261 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 SPATA25Q9BR10 227 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 CRISP2P16562 243 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 AKR1C3P42330 323 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 GFI1BQ5VTD9 330 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 ZFAND2AQ8N6M9 145 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 C2CD4CQ8TF44 421 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 RNF183Q96D59 192 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 TVP23CQ96ET8 276 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 IGF2BP2-AS1Q96M15 143 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 FAM210AQ96ND0 272 aa15.43■□□□□ 0.06
VPS29-206ENST00000549578 COL7A1Q02388 2944 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 SPRY2O43597 315 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 INSP01308 110 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 ZNF506Q5JVG8 444 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 PRR9Q5T870 116 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 OVOL2Q9BRP0 275 aa15.42■□□□□ 0.06
VPS29-206ENST00000549578 TENM3Q9P273 2699 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 HUWE1Q7Z6Z7 4374 aaKnown RBP15.41■□□□□ 0.06
VPS29-206ENST00000549578 KLLNB2CW77 178 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 PDE6DO43924 150 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 RBMY1A1P0DJD3 496 aaKnown RBP15.41■□□□□ 0.06
VPS29-206ENST00000549578 RBMY1CP0DJD4 496 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 BTN1A1Q13410 526 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 RBMY1FQ15415 496 aaKnown RBP15.41■□□□□ 0.06
VPS29-206ENST00000549578 C11orf52Q96A22 123 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 EIF5A2Q9GZV4 153 aaKnown RBP15.41■□□□□ 0.06
VPS29-206ENST00000549578 ZMAT4Q9H898 229 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 LENEPQ9Y5L5 61 aa15.41■□□□□ 0.06
VPS29-206ENST00000549578 IGHV3OR16-12A0A075B7B8 117 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 TRBV7-9A0A0J9YWB2 115 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 GPX1P07203 203 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 UBE2G1P62253 170 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 Q86TA4 180 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 C1orf158Q8N1D5 194 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 FMC1Q96HJ9 113 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 TREM1Q9NP99 234 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 TP53TG1Q9Y2A0 90 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 KLF12Q9Y4X4 402 aa15.4■□□□□ 0.06
VPS29-206ENST00000549578 FBLL1A6NHQ2 334 aaKnown RBP15.39■□□□□ 0.05
VPS29-206ENST00000549578 NHLRC4P0CG21 123 aaPredicted RBP15.39■□□□□ 0.05
VPS29-206ENST00000549578 RNASE4P34096 147 aaKnown RBP15.39■□□□□ 0.05
VPS29-206ENST00000549578 TMEM183BQ1AE95 376 aa15.39■□□□□ 0.05
VPS29-206ENST00000549578 CLLU1Q5K131 121 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms