RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZNF90Q03938 601 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 KLRD1Q13241 179 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 NSUN5P1Q3KNT7 163 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 AKR1C8PQ5T2L2 129 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 LCN12Q6JVE5 192 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 Q6ZRG5 221 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 LINC00479Q96M42 142 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 VGLL1Q99990 258 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 BEX2Q9BXY8 128 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 CHIAQ9BZP6 476 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 TRBV20OR9-2A0A075B6H5 130 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 ARF6P62330 175 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 RHOGP84095 191 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 FAM106AQ4KMX7 169 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 COMMD7Q86VX2 200 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 OR4F17Q8NGA8 305 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 OR4F4Q96R69 305 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 PAXXQ9BUH6 204 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 SH3BGRL3Q9H299 93 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 SACSQ9NZJ4 4579 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 C9JQL5 133 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 H3BUX3 64 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 K7EN84 100 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 AKR1C2P52895 323 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 FXYD4P59646 89 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 RAB4BP61018 213 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 LINC01545Q5VT33 79 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 COL6A3P12111 3177 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 C20orf202A1L168 122 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 LYRM9A8MSI8 78 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 DLEU1O43261 78 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 RNASE4P34096 147 aaKnown RBP3.55□□□□□ -1.84
SCAF11-212ENST00000549162 SLURP1P55000 103 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
SCAF11-212ENST00000549162 EDDM3AQ14507 147 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 ZNF124Q15973 351 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 NEXN-AS1Q8NBZ9 246 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 OR4X2Q8NGF9 303 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 DCHS1Q96JQ0 3298 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 ZGRF1Q86YA3 2104 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 COL6A6A6NMZ7 2263 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 TRAV12-1A0A0B4J245 112 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 IFNA4P05014 189 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 GATA2P23769 480 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-212ENST00000549162 ELOBQ15370 118 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 C15orf32Q32M92 178 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 ZNF355PQ9NSJ1 428 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 CACNA1BQ00975 2339 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 LYSTQ99698 3801 aa3.55□□□□□ -1.84
SCAF11-212ENST00000549162 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 ID1P41134 155 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 ZNF138P52744 262 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 VPS13CQ709C8 3753 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 IGHV1OR15-1A0A075B7D0 117 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 hDV102S1A0JD36 115 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 NBEAP1P0C6P0 100 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 CRIP1P50238 77 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 FLI1Q01543 452 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-212ENST00000549162 TNXAQ16473 311 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 MOB3BQ86TA1 216 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 MUC6Q6W4X9 2439 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 DOPEY1Q5JWR5 2465 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 IGHV3-43A0A0B4J1X8 118 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 TRAV4A0A0B4J268 109 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 H3BMM0 161 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 CA1P00915 261 aaPredicted RBP3.54□□□□□ -1.84
SCAF11-212ENST00000549162 PRB1P04280 392 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 METTL15P1P0C7V9 234 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 ARL14EPLP0DKL9 152 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 IGHV3-43DP0DP04 118 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 CBLN1P23435 193 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 TMEM241Q24JQ0 296 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 LCNL1Q6ZST4 164 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 LINC00305Q7Z4B0 112 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 NEK7Q8TDX7 302 aa3.54□□□□□ -1.84
SCAF11-212ENST00000549162 LYNX1G3V0Z9 82 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 H3BQ15 152 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 LYNX1P0DP58 116 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 LAMA1P25391 3075 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 RAB14P61106 215 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 LRRC37A5PQ49AS3 106 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 LEMD1Q68G75 181 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 H1FXQ92522 213 aaKnown RBP3.53□□□□□ -1.84
SCAF11-212ENST00000549162 Q9H3A6 140 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 ATMQ13315 3056 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 SFTA3P0C7M3 94 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 G0S2P27469 103 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 UBE2G2P60604 165 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 RHOHQ15669 191 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 MIR17HGQ75NE6 70 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 TPRX1Q8N7U7 411 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 OR1N2Q8NGR9 330 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 PARLQ9H300 379 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms