RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 C7orf71A4D174 169 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 SLC25A5P05141 298 aaKnown RBP10.36□□□□□ -0.75
LINC00661-203ENST00000549131 NBEAP1P0C6P0 100 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 KHDC3LQ587J8 217 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 RNF141Q8WVD5 230 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 FXYD5Q96DB9 178 aa10.36□□□□□ -0.75
LINC00661-203ENST00000549131 IGLV2-18A0A075B6J9 118 aa10.35□□□□□ -0.75
LINC00661-203ENST00000549131 M0R2N4 97 aa10.35□□□□□ -0.75
LINC00661-203ENST00000549131 BTN1A1Q13410 526 aa10.35□□□□□ -0.75
LINC00661-203ENST00000549131 PYGO2Q9BRQ0 406 aa10.35□□□□□ -0.75
LINC00661-203ENST00000549131 AGPAT4-IT1Q9H0P7 198 aa10.35□□□□□ -0.75
LINC00661-203ENST00000549131 CBY3A6NI87 242 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 NUDT3O95989 172 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 GPX1P07203 203 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 TAS2R45P59539 299 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 LINC00477Q96M19 166 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 VGLL1Q99990 258 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 WFDC1Q9HC57 220 aa10.34□□□□□ -0.75
LINC00661-203ENST00000549131 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 KLLNB2CW77 178 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 GAGE7O76087 117 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 GAGE12FP0CL80 117 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 GAGE12GP0CL81 117 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 GAGE12IP0CL82 117 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
LINC00661-203ENST00000549131 RANP62826 216 aaKnown RBP10.33□□□□□ -0.76
LINC00661-203ENST00000549131 CD300CQ08708 224 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 RNF212Q495C1 297 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 Q8TAT8 98 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 FAM19A4Q96LR4 140 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 ATG101Q9BSB4 218 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 MED28Q9H204 178 aa10.33□□□□□ -0.76
LINC00661-203ENST00000549131 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC00661-203ENST00000549131 CRISP2P16562 243 aa10.32□□□□□ -0.76
LINC00661-203ENST00000549131 CSN1S1P47710 185 aa10.32□□□□□ -0.76
LINC00661-203ENST00000549131 PRR9Q5T870 116 aa10.32□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF680Q8NEM1 530 aa10.32□□□□□ -0.76
LINC00661-203ENST00000549131 Q9H3A6 140 aa10.32□□□□□ -0.76
LINC00661-203ENST00000549131 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
LINC00661-203ENST00000549131 RAB2AP61019 212 aa10.31□□□□□ -0.76
LINC00661-203ENST00000549131 OR5I1Q13606 314 aa10.31□□□□□ -0.76
LINC00661-203ENST00000549131 ACOT6Q3I5F7 207 aaPredicted RBP10.31□□□□□ -0.76
LINC00661-203ENST00000549131 EIF4E3Q8N5X7 224 aaKnown RBP10.31□□□□□ -0.76
LINC00661-203ENST00000549131 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
LINC00661-203ENST00000549131 A0A1W2PPV4 95 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 RGS13O14921 159 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 M6PRP20645 277 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF138P52744 262 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 Q6ZTI0 123 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 LYPD1Q8N2G4 141 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 HYLS1Q96M11 299 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 TMPRSS5Q9H3S3 457 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 GSN-AS1Q9NRJ2 163 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 RPH3ALQ9UNE2 315 aa10.3□□□□□ -0.76
LINC00661-203ENST00000549131 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
LINC00661-203ENST00000549131 NMBP08949 121 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 DAZ2Q13117 558 aaKnown RBP10.29□□□□□ -0.76
LINC00661-203ENST00000549131 ZNF266Q14584 549 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 HSD17B11Q8NBQ5 300 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 LINC00467Q9BRT7 94 aa10.29□□□□□ -0.76
LINC00661-203ENST00000549131 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 TRGV1A0A0A0MS02 117 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 A0A0J9YY99 117 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 RBAKDNA6NC62 111 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
LINC00661-203ENST00000549131 HOXA5P20719 270 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 FAM3BP58499 235 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-203ENST00000549131 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 PQLC2Q6ZP29 291 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 OR10G9Q8NGN4 311 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 CMTM2Q8TAZ6 248 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
LINC00661-203ENST00000549131 AQP10Q96PS8 301 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 FAT2Q9NYQ8 4349 aa10.28□□□□□ -0.76
LINC00661-203ENST00000549131 MUC4Q99102 2169 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 DIRC3C9JPN6 131 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 RTL8CO15255 209 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
LINC00661-203ENST00000549131 CCL18P55774 89 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 TCL1AP56279 114 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 FAM74A1Q5RGS3 127 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 Q6ZQT7 251 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 Q6ZR54 194 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 RXFP4Q8TDU9 374 aa10.27□□□□□ -0.77
LINC00661-203ENST00000549131 DNAH17Q9UFH2 4485 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms