RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 AKAP12Q02952 1782 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 DLEC1Q9Y238 1755 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 SNRNP200O75643 2136 aaKnown RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC141Q6ZP82 1450 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 ANKRD31Q8N7Z5 1873 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 MED13LQ71F56 2210 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 AKAP11Q9UKA4 1901 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 IQGAP3Q86VI3 1631 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 OR4C46A6NHA9 309 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 PIRO00625 290 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 CCL25O15444 150 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 OR4E1P0C645 316 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 SULT1A1P50225 295 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 YPEL3P61236 119 aaPredicted RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 MAGOHP61326 146 aaKnown RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 PSG9Q00887 426 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 OR2F1Q13607 317 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 ACOT6Q3I5F7 207 aaPredicted RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 CDKL4Q5MAI5 379 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 BRMS1LQ5PSV4 323 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 KRT222Q8N1A0 295 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 TEX47Q8TBZ9 253 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 DDI1Q8WTU0 396 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 TSPAN32Q96QS1 320 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 TRIM4Q9C037 500 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 UTP11Q9Y3A2 253 aaKnown RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 V9GYY5 206 aaPredicted RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 WNK1Q9H4A3 2382 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 TNXBP22105 4242 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 SCN3AQ9NY46 2000 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 E9PCH4 1651 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 ZNF831Q5JPB2 1677 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 GCC2Q8IWJ2 1684 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 LRRC37AA6NMS7 1700 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 DDX60LQ5H9U9 1706 aaKnown RBP0.29□□□□□ -2.36
CCDC38-206ENST00000548771 NRXN2Q9P2S2 1712 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 NUP155O75694 1391 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 LOC285556D6RIA3 1793 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 RGPD5Q99666 1765 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 LRP1BQ9NZR2 4599 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 ARHGAP31Q2M1Z3 1444 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 PPIP5K1Q6PFW1 1433 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 PLXNA1Q9UIW2 1896 aa0.29□□□□□ -2.36
CCDC38-206ENST00000548771 APOBP04114 4563 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 DSTQ03001 7570 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 STAB2Q8WWQ8 2551 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH5Q8TE73 4624 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 LAMB1P07942 1786 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 C7orf71A4D174 169 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 OR2T8A6NH00 312 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 OR2J2O76002 312 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 IFNA5P01569 189 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 RBP1P09455 135 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 SMIM10L2AP0DMW4 78 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 SMIM10L2BP0DMW5 78 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 CASP1P29466 404 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 EFNA4P52798 201 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 ESRGQ1W209 222 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 LINC01554Q52M75 96 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 SPRNQ5BIV9 151 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 LINC00301Q8NCQ3 95 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 C20orf27Q9GZN8 174 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 DCSTAMPQ9H295 470 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 MRPL27Q9P0M9 148 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 TMEM14CQ9P0S9 112 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 SIP14410 1827 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 AFDNP55196 1824 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 LRP1Q07954 4544 aaKnown RBP0.28□□□□□ -2.36
CCDC38-206ENST00000548771 DOCK5Q9H7D0 1870 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 ARHGEF10O15013 1369 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 CPDO75976 1380 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 ATG2AQ2TAZ0 1938 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 DENND4CQ5VZ89 1909 aa0.28□□□□□ -2.36
CCDC38-206ENST00000548771 FYCO1Q9BQS8 1478 aa0.28□□□□□ -2.37
CCDC38-206ENST00000548771 DNAH17Q9UFH2 4485 aa0.28□□□□□ -2.37
CCDC38-206ENST00000548771 SRRM2Q9UQ35 2752 aaKnown RBP0.28□□□□□ -2.37
CCDC38-206ENST00000548771 AHCTF1Q8WYP5 2266 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 CNTRLQ7Z7A1 2325 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 FAM208AQ9UK61 1670 aaKnown RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 SPTBN1Q01082 2364 aaKnown RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 DDX60Q8IY21 1712 aaKnown RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 DNAH11Q96DT5 4516 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 FANCMQ8IYD8 2048 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 DOCK3Q8IZD9 2030 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 A0A087X0T9 212 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 TRAV26-2A0A0B4J265 109 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 M0R036 132 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 AHSA1O95433 338 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 ANP32AP39687 249 aaKnown RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 NKX2-5P52952 324 aaPredicted RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 RHOBP62745 196 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 SRSF6Q13247 344 aaKnown RBP0.27□□□□□ -2.37
CCDC38-206ENST00000548771 VPS29Q9UBQ0 182 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 CYSLTR1Q9Y271 337 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 MED12Q93074 2177 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 MYO3BQ8WXR4 1341 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 ANKRD36BQ8N2N9 1353 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms