RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 TRPT1Q86TN4 253 aaKnown RBP12.62□□□□□ -0.39
KRT4-201ENST00000548097 CYB561D1Q8N8Q1 229 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
KRT4-201ENST00000548097 IGLV2-11P01706 119 aa12.61□□□□□ -0.39
KRT4-201ENST00000548097 KIR3DS1Q14943 382 aa12.61□□□□□ -0.39
KRT4-201ENST00000548097 M0R2Z0 102 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 HIST1H2BAQ96A08 127 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 AMTNQ6UX39 209 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 C9orf47Q6ZRZ4 202 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 C2CD4CQ8TF44 421 aa12.6□□□□□ -0.39
KRT4-201ENST00000548097 AKR1C3P42330 323 aa12.59□□□□□ -0.39
KRT4-201ENST00000548097 DEFA6Q01524 100 aa12.59□□□□□ -0.39
KRT4-201ENST00000548097 TVP23CQ96ET8 276 aa12.59□□□□□ -0.39
KRT4-201ENST00000548097 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 F6UZH7 168 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 PDE6DO43924 150 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 SRP19P09132 144 aaKnown RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 PSG8Q9UQ74 426 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 LOC102724200A0A096LPH7 203 aaPredicted RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
KRT4-201ENST00000548097 ZNF674Q2M3X9 581 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 COMMD7Q86VX2 200 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 NHLRC2Q8NBF2 726 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
KRT4-201ENST00000548097 K7EQM0 130 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 ZNF138P52744 262 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 UBE2G1P62253 170 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 ARL6IP6Q8N6S5 226 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 C11orf52Q96A22 123 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
KRT4-201ENST00000548097 MEGF8Q7Z7M0 2845 aa12.56□□□□□ -0.4
KRT4-201ENST00000548097 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
KRT4-201ENST00000548097 PEA15Q15121 130 aa12.56□□□□□ -0.4
KRT4-201ENST00000548097 PRR9Q5T870 116 aa12.56□□□□□ -0.4
KRT4-201ENST00000548097 Q6ZQT7 251 aa12.56□□□□□ -0.4
KRT4-201ENST00000548097 SERTM2A0A1B0GWG4 89 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 A8MTW9 85 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
KRT4-201ENST00000548097 LINC00322Q6ZN03 302 aaPredicted RBP12.55□□□□□ -0.4
KRT4-201ENST00000548097 Q86TA4 180 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 PARLQ9H300 379 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 KLF12Q9Y4X4 402 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
KRT4-201ENST00000548097 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
KRT4-201ENST00000548097 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
KRT4-201ENST00000548097 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
KRT4-201ENST00000548097 A8MZ25 164 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 TMEM250H0YL14 139 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 CRXO43186 299 aaPredicted RBP12.53□□□□□ -0.4
KRT4-201ENST00000548097 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 CDKN1BP46527 198 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
KRT4-201ENST00000548097 LTAP01374 205 aa12.52□□□□□ -0.41
KRT4-201ENST00000548097 GPX1P07203 203 aa12.52□□□□□ -0.41
KRT4-201ENST00000548097 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
KRT4-201ENST00000548097 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
KRT4-201ENST00000548097 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.41
KRT4-201ENST00000548097 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
KRT4-201ENST00000548097 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.41
KRT4-201ENST00000548097 RBMY1FQ15415 496 aaKnown RBP12.52□□□□□ -0.41
KRT4-201ENST00000548097 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.41
KRT4-201ENST00000548097 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.41
KRT4-201ENST00000548097 BAGE2Q86Y30 109 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 NBEAL2Q6ZNJ1 2754 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 PRM2P04554 102 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 LEPP41159 167 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 DEFB135Q30KP9 77 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 MORN3Q6PF18 240 aaPredicted RBP12.51□□□□□ -0.41
KRT4-201ENST00000548097 ZC2HC1AQ96GY0 325 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 RETNQ9HD89 108 aa12.51□□□□□ -0.41
KRT4-201ENST00000548097 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
KRT4-201ENST00000548097 KLLNB2CW77 178 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms