RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CBLN1P23435 193 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
CCDC65-203ENST00000547861 CDX1P47902 265 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-203ENST00000547861 TPPP2P59282 170 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 Q6ZS46 218 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
CCDC65-203ENST00000547861 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 TRAPPC1Q9Y5R8 145 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 PKD1L1Q8TDX9 2849 aa6.23□□□□□ -1.41
CCDC65-203ENST00000547861 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 M0R3E3 92 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 BRI3O95415 125 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 FRMD6-AS1P0C7T7 363 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PRB4P10163 310 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 S100A7P31151 101 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 NUTF2P61970 127 aaKnown RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 RBX1P62877 108 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 BLCAPP62952 87 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 LINC00322Q6ZN03 302 aaPredicted RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PRNTQ86SH4 94 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 TMEM183AQ8IXX5 376 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 GLMPQ8WWB7 406 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 AAMDCQ9H7C9 122 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 SMAD5-AS1Q9Y6J3 95 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 TRRAPQ9Y4A5 3859 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 A0A087X0K7 114 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 C19orf71A6NCJ1 209 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 IZUMO1RA6ND01 250 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 CBY3A6NI87 242 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PAX4O43316 350 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 ZNF253O75346 499 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 IER3P46695 156 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 SLC35B1P78383 322 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PSG9Q00887 426 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 CFHR3Q02985 330 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PSG3Q16557 428 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 C12orf54Q6X4T0 127 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 TPPP3Q9BW30 176 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 MRPL18Q9H0U6 180 aaKnown RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 RPP21Q9H633 154 aaKnown RBP6.22□□□□□ -1.41
CCDC65-203ENST00000547861 ZNF580Q9UK33 172 aa6.22□□□□□ -1.41
CCDC65-203ENST00000547861 SNURFLB1AK76 121 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 K7EQM0 130 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 ZNF207O43670 478 aaKnown RBP6.21□□□□□ -1.42
CCDC65-203ENST00000547861 BUB3O43684 328 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 SPINK4O60575 86 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 TRBV12-3P01733 135 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 ARL3P36405 182 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 RAB9AP51151 201 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 SCGB2A2Q13296 93 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 MRPL54Q6P161 138 aaKnown RBP6.21□□□□□ -1.42
CCDC65-203ENST00000547861 C9orf139Q6ZV77 190 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 GBGT1Q8N5D6 347 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 ZC2HC1AQ96GY0 325 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 METTL26Q96S19 204 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 ASCL2Q99929 193 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 PSG8Q9UQ74 426 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 GOLT1BQ9Y3E0 138 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
CCDC65-203ENST00000547861 IGKV2-40A0A087WW87 121 aaPredicted RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 IGHV3-66A0A0C4DH42 116 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 IGKV2D-40P01614 121 aaPredicted RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 IGLV1-40P01703 118 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 P01737 135 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 APOHP02749 345 aaPredicted RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 PPBPP02775 128 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 RPL19P84098 196 aaKnown RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 CT83Q5H943 113 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 TMEM136Q6ZRR5 245 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 LCNL1Q6ZST4 164 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 OR5R1Q8NH85 324 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 TSKUQ8WUA8 353 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 C14orf144Q96I85 54 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 USMG5Q96IX5 58 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 PACRGQ96M98 296 aaPredicted RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 PRSS22Q9GZN4 317 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 KLK15Q9H2R5 256 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 VCX2Q9H322 139 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 PRDM13Q9H4Q3 707 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 ZNF331Q9NQX6 463 aaPredicted RBP6.2□□□□□ -1.42
CCDC65-203ENST00000547861 U3KQE9 123 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
CCDC65-203ENST00000547861 IGHV3OR16-13A0A075B7E8 117 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 IGHV3-49A0A0A0MS15 119 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 IGHV3-74A0A0B4J1X5 117 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 A0A1B0GUS0 222 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 ZNF785A8K8V0 405 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 CHEK1O14757 476 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 IGHV3-11P01762 117 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 IGHG4P01861 327 aa6.19□□□□□ -1.42
CCDC65-203ENST00000547861 MT-ND6P03923 174 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms