RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 OR5C1Q8NGR4 320 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
CPSF6-204ENST00000547486 PYGO2Q9BRQ0 406 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
CPSF6-204ENST00000547486 C7orf71A4D174 169 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 SNURFLB1AK76 121 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 KLLNB2CW77 178 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
CPSF6-204ENST00000547486 M6PRP20645 277 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
CPSF6-204ENST00000547486 BTN1A1Q13410 526 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 CLINT1Q14677 625 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 ICAM4Q14773 271 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 ESRGQ1W209 222 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 C11orf72Q8NBR9 251 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 RXFP4Q8TDU9 374 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 S100ZQ8WXG8 99 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 TMPRSS5Q9H3S3 457 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 Q9H8V8 135 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 PRELID1Q9Y255 219 aa9.26□□□□□ -0.93
CPSF6-204ENST00000547486 ABCA13Q86UQ4 5058 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 UPK1BO75841 260 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
CPSF6-204ENST00000547486 PDE6HQ13956 83 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 LRRC37A5PQ49AS3 106 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 C9orf47Q6ZRZ4 202 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 ZNF503Q96F45 646 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 VGLL1Q99990 258 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 NMES1Q9C002 83 aa9.25□□□□□ -0.93
CPSF6-204ENST00000547486 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
CPSF6-204ENST00000547486 E5RGE8 158 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
CPSF6-204ENST00000547486 NBEAP1P0C6P0 100 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 CRISP2P16562 243 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 H2BFSP57053 126 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 PRR9Q5T870 116 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 FAM122CQ6P4D5 195 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 ENKURQ8TC29 256 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 WDR61Q9GZS3 305 aaKnown RBP9.24□□□□□ -0.93
CPSF6-204ENST00000547486 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 TP53TG3Q9ULZ0 132 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
CPSF6-204ENST00000547486 GPX1P07203 203 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 OR10J4P0C629 311 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 OR51M1Q9H341 326 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
CPSF6-204ENST00000547486 A6NHS1 94 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 INMT-MINDY4F8WBC2 141 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 H3BNG1 76 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 EIF4E3Q8N5X7 224 aaKnown RBP9.22□□□□□ -0.93
CPSF6-204ENST00000547486 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 ZNF492Q9P255 531 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 FUT9Q9Y231 359 aa9.22□□□□□ -0.93
CPSF6-204ENST00000547486 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 A0A096LPF7 62 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 SPINK4O60575 86 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 NMBP08949 121 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 ZNF680Q8NEM1 530 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 PPP1R1CQ8WVI7 109 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 PHYHIPLQ96FC7 376 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 MARVELD1Q9BSK0 173 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 UPK3BQ9BT76 320 aa9.21□□□□□ -0.94
CPSF6-204ENST00000547486 PRAF2O60831 178 aa9.2□□□□□ -0.94
CPSF6-204ENST00000547486 TCL1AP56279 114 aa9.2□□□□□ -0.94
CPSF6-204ENST00000547486 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
CPSF6-204ENST00000547486 CYCSP99999 105 aaKnown RBP9.2□□□□□ -0.94
CPSF6-204ENST00000547486 Q8TAT8 98 aa9.2□□□□□ -0.94
CPSF6-204ENST00000547486 MRPL32Q9BYC8 188 aaKnown RBP9.2□□□□□ -0.94
CPSF6-204ENST00000547486 MRPS16Q9Y3D3 137 aaKnown RBP9.2□□□□□ -0.94
CPSF6-204ENST00000547486 IGHV1OR15-1A0A075B7D0 117 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPSF6-204ENST00000547486 MPC2O95563 127 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 ZNF138P52744 262 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 ATP5SQ99766 215 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 Q9H3A6 140 aa9.19□□□□□ -0.94
CPSF6-204ENST00000547486 MRPL16Q9NX20 251 aaKnown RBP9.19□□□□□ -0.94
CPSF6-204ENST00000547486 C17orf112F2Z3M2 114 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 RGS13O14921 159 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 OR7C2O60412 319 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 IBA57Q5T440 356 aaKnown RBP9.18□□□□□ -0.94
CPSF6-204ENST00000547486 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 SMIM3Q9BZL3 60 aa9.18□□□□□ -0.94
CPSF6-204ENST00000547486 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms