RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 SRD5A1P18405 259 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 SRSF2Q01130 221 aaKnown RBP4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 FAM162BQ5T6X4 162 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 Q6AWC8 147 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 LCN12Q6JVE5 192 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 Q6ZSV7 163 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 KLHDC1Q8N7A1 406 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 ZNF418Q8TF45 676 aaPredicted RBP4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 FRZBQ92765 325 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 C16orf92Q96LL3 132 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 DUX5Q96PT3 197 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 PRR25Q96S07 402 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 NEU1Q99519 415 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 RHPN1-AS1Q9BWJ2 59 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 GNB1LQ9BYB4 327 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 C16orf95Q9H693 158 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 NRN1Q9NPD7 142 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 PPP1R14DQ9NXH3 145 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 SMPXQ9UHP9 88 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 LENEPQ9Y5L5 61 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 TRAPPC1Q9Y5R8 145 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 TACC2O95359 2948 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 POLQO75417 2590 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.75
NPIPB3-214ENST00000545358 ABCA12Q86UK0 2595 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 UTP20O75691 2785 aaKnown RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 APCP25054 2843 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 IGHV4OR15-8A0A075B7B6 117 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 A0A087WW49 117 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 A0A1B0GXF2 115 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 TMEM213A2RRL7 107 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 HIGD1CA8MV81 97 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 SNURFLB1AK76 121 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 LINC01619G3V211 115 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 M0QZ24 198 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 OVOL1O14753 267 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 NDUFA7O95182 113 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 CA1P00915 261 aaPredicted RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 S100A8P05109 93 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 HLA-DMBP28068 263 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 CDX1P47902 265 aaPredicted RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 TCL1AP56279 114 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 HILS1P60008 231 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 SNRPEP62304 92 aaKnown RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 FABP9Q0Z7S8 132 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 SMUG1Q53HV7 270 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 TM4SF20Q53R12 229 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 COA6Q5JTJ3 125 aaKnown RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 TMEM78Q5T7P6 136 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 LINC00322Q6ZN03 302 aaPredicted RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 RBPMS2Q6ZRY4 209 aaKnown RBP4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 RNF182Q8N6D2 247 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 ZNF738Q8NE65 137 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 NUP35Q8NFH5 326 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 OR2D3Q8NGH3 330 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 C8orf49Q96NF6 230 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 VGLL1Q99990 258 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 ESM1Q9NQ30 184 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 TENM4Q6N022 2769 aa4.14□□□□□ -1.75
NPIPB3-214ENST00000545358 CELSR2Q9HCU4 2923 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 TRBV7-9A0A0J9YWB2 115 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 A0A1B0GW15 77 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 C2orf70A6NJV1 201 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 SH2D1AO60880 128 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 HOXA5P20719 270 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 CBLN1P23435 193 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 ID1P41134 155 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 ZNF138P52744 262 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 FOXA3P55318 350 aaPredicted RBP4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 NDUFA6P56556 154 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 HBBP68871 147 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 KLF5Q13887 457 aaPredicted RBP4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 IGFL4Q6B9Z1 124 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 MRPL54Q6P161 138 aaKnown RBP4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 TMEM136Q6ZRR5 245 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 TCF24Q7RTU0 167 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 OR10J6PQ8NGY7 276 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 Q8TAT8 98 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 ASCL2Q99929 193 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 GPR61Q9BZJ8 451 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
NPIPB3-214ENST00000545358 TRAV2A0A0B4J234 112 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 TMEM189A5PLL7 270 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 CTRLP40313 264 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 CRIP1P50238 77 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 SYNJ2BPP57105 145 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 RPL11P62913 178 aaKnown RBP4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 HIST1H1AQ02539 215 aaPredicted RBP4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 ERCC8Q13216 396 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 KHDC1LQ5JSQ8 128 aa4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 Q71RC1 249 aaPredicted RBP4.12□□□□□ -1.75
NPIPB3-214ENST00000545358 GATD1Q8NB37 220 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms