RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 HBE1P02100 147 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 SLC25A5P05141 298 aaKnown RBP6.96□□□□□ -1.3
CIT-216ENST00000544872 H2AFB1P0C5Y9 115 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 CDKN1BP46527 198 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 IGF2BP2-AS1Q96M15 143 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 OVOL2Q9BRP0 275 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 NIPSNAP3BQ9BS92 247 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 MAP1LC3BQ9GZQ8 125 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 SORL1Q92673 2214 aa6.96□□□□□ -1.3
CIT-216ENST00000544872 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 SLC17A3O00476 420 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 NDUFB4O95168 129 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 IFNA1P01562 189 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 GPX1P07203 203 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 NMBP08949 121 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 ZNF705DP0CH99 300 aaPredicted RBP6.95□□□□□ -1.3
CIT-216ENST00000544872 ZNF705BP0CI00 300 aaPredicted RBP6.95□□□□□ -1.3
CIT-216ENST00000544872 HLA-DMBP28068 263 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 FXYD7P58549 80 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 PHYHIPLQ96FC7 376 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 ODF3Q96PU9 254 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 LINC01587Q99440 93 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 C20orf144Q9BQM9 153 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 EDA2RQ9HAV5 297 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 RPH3ALQ9UNE2 315 aa6.95□□□□□ -1.3
CIT-216ENST00000544872 TRBV7-9A0A0J9YWB2 115 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 TEX48A0A1B0GUV7 120 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 ZNF138P52744 262 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
CIT-216ENST00000544872 SPINK13Q1W4C9 94 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 C5orf17Q8NAS9 161 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 SLC35B3Q9H1N7 401 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 RETNQ9HD89 108 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 LENEPQ9Y5L5 61 aa6.94□□□□□ -1.3
CIT-216ENST00000544872 A0A1B0GVG6 124 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 DIRC3C9JPN6 131 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 H7BYZ3 331 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 M0R3E3 92 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 HTN1P15515 57 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 DEFB1P60022 68 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 HIST1H2BAQ96A08 127 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 NEU1Q99519 415 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 ARL2-SNX15V9GYD0 113 aa6.93□□□□□ -1.3
CIT-216ENST00000544872 PLECQ15149 4684 aaKnown RBP6.93□□□□□ -1.3
CIT-216ENST00000544872 CXorf65A6NEN9 183 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 ZNF705EA8MWA4 302 aaPredicted RBP6.92□□□□□ -1.3
CIT-216ENST00000544872 PRAC2D3DTV9 90 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 M0R2Z0 102 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
CIT-216ENST00000544872 TAGLN2P37802 199 aaKnown RBP6.92□□□□□ -1.3
CIT-216ENST00000544872 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
CIT-216ENST00000544872 TAS2R60P59551 318 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 UBE2G2P60604 165 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 SAPCD1Q5SSQ6 148 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 GOLT1AQ6ZVE7 132 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 C9orf62Q8N4C0 152 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 ATG101Q9BSB4 218 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 MANBALQ9NQG1 85 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 EPDR1Q9UM22 224 aa6.92□□□□□ -1.3
CIT-216ENST00000544872 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
CIT-216ENST00000544872 A0A0J9YWU9 116 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 A8MTW9 85 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 J3KRW8 73 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
CIT-216ENST00000544872 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
CIT-216ENST00000544872 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 CT45A10P0DMU9 189 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 RNASE4P34096 147 aaKnown RBP6.91□□□□□ -1.3
CIT-216ENST00000544872 FHITP49789 147 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 SULT1A2P50226 295 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 UBE2G1P62253 170 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 ERCC8Q13216 396 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 ZNF493Q6ZR52 646 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 CYB561D1Q8N8Q1 229 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 PYGO2Q9BRQ0 406 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
CIT-216ENST00000544872 ZNF492Q9P255 531 aa6.91□□□□□ -1.3
CIT-216ENST00000544872 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
CIT-216ENST00000544872 A0A1B0GV50 99 aa6.9□□□□□ -1.3
CIT-216ENST00000544872 C7orf71A4D174 169 aa6.9□□□□□ -1.3
CIT-216ENST00000544872 RGS13O14921 159 aa6.9□□□□□ -1.3
CIT-216ENST00000544872 TCRAP04437 139 aa6.9□□□□□ -1.3
CIT-216ENST00000544872 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.3
CIT-216ENST00000544872 EMP1P54849 157 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms