RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 TRBV7-1A0A0A6YYK4 115 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 A0A1B0GW15 77 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 VPS25Q9BRG1 176 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 MEGF9Q9H1U4 602 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
SCNN1A-221ENST00000543768 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 CBY3A6NI87 242 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 LYZL1Q6UWQ5 148 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 CST9LQ9H4G1 147 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV3-66A0A0C4DH42 116 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 NDUFS8O00217 210 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 ZNF575Q86XF7 245 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
SCNN1A-221ENST00000543768 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
SCNN1A-221ENST00000543768 ZNF138P52744 262 aa12.4□□□□□ -0.42
SCNN1A-221ENST00000543768 OCIAD2Q56VL3 154 aa12.4□□□□□ -0.42
SCNN1A-221ENST00000543768 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.43
SCNN1A-221ENST00000543768 PRAC2D3DTV9 90 aa12.4□□□□□ -0.43
SCNN1A-221ENST00000543768 ATP5G2Q06055 141 aa12.4□□□□□ -0.43
SCNN1A-221ENST00000543768 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.43
SCNN1A-221ENST00000543768 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
SCNN1A-221ENST00000543768 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
SCNN1A-221ENST00000543768 ATP5J2P56134 94 aa12.39□□□□□ -0.43
SCNN1A-221ENST00000543768 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
SCNN1A-221ENST00000543768 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 ERCC8Q13216 396 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 LINC00173Q6ZV60 143 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 U3KQE9 123 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 ZNF207O43670 478 aaKnown RBP12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 BMI1P35226 326 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
SCNN1A-221ENST00000543768 IGHV3-49A0A0A0MS15 119 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 METTL26Q96S19 204 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 ATP6V0BQ99437 205 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 SLC50A1Q9BRV3 221 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 FAM223BA6NKX1 122 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 MPV17L2Q567V2 206 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 ERASQ7Z444 233 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 FAM223AQ8IWN6 122 aa12.37□□□□□ -0.43
SCNN1A-221ENST00000543768 TRAV8-2A0A0B4J237 113 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 CSN3P07498 182 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 TRGV3P03979 118 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 IGF1P05019 195 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 CSTL1Q9H114 145 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
SCNN1A-221ENST00000543768 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 SRSF2Q01130 221 aaKnown RBP12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 LY6EQ16553 131 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 MUC21Q5SSG8 566 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 BVES-AS1Q5T3Y7 98 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 DOPEY1Q5JWR5 2465 aa12.35□□□□□ -0.43
SCNN1A-221ENST00000543768 A6NDX4 124 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 FABP5P3A8MUU1 101 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 MSMBP08118 114 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 OR5AL1P0C617 328 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 U3KQK5 164 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 FLNCQ14315 2725 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 SPG11Q96JI7 2443 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 H3BUX3 64 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 NUDT3O95989 172 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 IGHG2P01859 326 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 AGPAT4-IT1Q9H0P7 198 aa12.34□□□□□ -0.43
SCNN1A-221ENST00000543768 D6R8Y8 96 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 ORM1P02763 201 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 ARL3P36405 182 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 AP5S1Q9NUS5 200 aa12.33□□□□□ -0.44
SCNN1A-221ENST00000543768 USP9XQ93008 2570 aaPredicted RBP12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 K7ERU9 68 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 AVPP01185 164 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms