RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 M0R3E3 92 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 NMBP08949 121 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
RTN3-213ENST00000543552 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 NMES1Q9C002 83 aa9.15□□□□□ -0.94
RTN3-213ENST00000543552 KLLNB2CW77 178 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 PRAF2O60831 178 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 NDUFB4O95168 129 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 GPX1P07203 203 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 PYYP10082 97 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
RTN3-213ENST00000543552 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 C18orf15Q96N68 181 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
RTN3-213ENST00000543552 TMPRSS5Q9H3S3 457 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 Q9H8V8 135 aa9.14□□□□□ -0.95
RTN3-213ENST00000543552 A0A0J9YY99 117 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 CRISP2P16562 243 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
RTN3-213ENST00000543552 HOXA5P20719 270 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
RTN3-213ENST00000543552 ERCC8Q13216 396 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 ICAM4Q14773 271 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 Q6ZTI0 123 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
RTN3-213ENST00000543552 RYR1P21817 5038 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 A0A1W2PPQ1 181 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 RGS13O14921 159 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 PET100P0DJ07 73 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 CSN1S1P47710 185 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 NHLH2Q02577 135 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 TNP2Q05952 138 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 LRRC37A5PQ49AS3 106 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
RTN3-213ENST00000543552 FAM122CQ6P4D5 195 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 FAM19A4Q96LR4 140 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 Q9H3A6 140 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
RTN3-213ENST00000543552 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
RTN3-213ENST00000543552 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
RTN3-213ENST00000543552 UPK1BO75841 260 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 TCL1AP56279 114 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 CD300CQ08708 224 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 MIR17HGQ75NE6 70 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 WDR61Q9GZS3 305 aaKnown RBP9.11□□□□□ -0.95
RTN3-213ENST00000543552 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
RTN3-213ENST00000543552 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-213ENST00000543552 OR7C2O60412 319 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 SIX6O95475 246 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-213ENST00000543552 ZNF138P52744 262 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 SLAQ13239 276 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 ATP5SQ99766 215 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
RTN3-213ENST00000543552 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 SPINK4O60575 86 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 TAS2R45P59539 299 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 ESRGQ1W209 222 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 FXYD5Q96DB9 178 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 VGLL1Q99990 258 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 MUC4Q99102 2169 aa9.09□□□□□ -0.95
RTN3-213ENST00000543552 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 IFNA5P01569 189 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 OR10J4P0C629 311 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 DEFA1P59665 94 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 DEFA3P59666 94 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
RTN3-213ENST00000543552 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 SCGB1C1Q8TD33 95 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 PPP1R1CQ8WVI7 109 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 ICOSQ9Y6W8 199 aa9.08□□□□□ -0.96
RTN3-213ENST00000543552 A0A096LPF7 62 aa9.07□□□□□ -0.96
RTN3-213ENST00000543552 H0YIZ8 118 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms