RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ELANEP08246 267 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 PRB4P10163 310 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 SPRY4Q9C004 299 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 ABCA2Q9BZC7 2435 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 DEFB130BP0DP73 79 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 DEFB130AP0DP74 79 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 DEFB112Q30KQ8 113 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 TRAV8-4A0A0B4J246 113 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 HOXA5P20719 270 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 CNTFRP26992 372 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 MGST2Q99735 147 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 JOSD1Q15040 202 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF833PQ6ZTB9 187 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 TRAV9-1A0A075B6T8 112 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 TRAV8-6A0A0B4J262 113 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 NDUFB8O95169 186 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV2-70P01814 119 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV4-39P01824 125 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 DAZAP2Q15038 168 aaPredicted RBP5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 C17orf58Q2M2W7 97 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 OSTCQ9NRP0 149 aa5.54□□□□□ -1.52
SRGAP1-206ENST00000543397 KLF5Q13887 457 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 ADARB2-AS1A8MUL3 147 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 DNAL4O96015 105 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 IGHV4-59P01825 116 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 TCRAP04437 139 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 RPL23P62829 140 aaKnown RBP5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 CHD8Q9HCK8 2581 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 IGKV3D-20A0A0C4DH25 116 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 IGKV1-6A0A0C4DH72 117 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 SPATA31B1PQ5VZV4 182 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 C8orf86Q6ZUL3 223 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 LYPD1Q8N2G4 141 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 Q8TAT8 98 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 XCL2Q9UBD3 114 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 KIF26AQ9ULI4 1882 aaPredicted RBP5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 C2orf16Q68DN1 1984 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 C15orf62A8K5M9 175 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 DPM2O94777 84 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 AMBPP02760 352 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 FOXL1Q12952 345 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 TCF23Q7RTU1 214 aa5.53□□□□□ -1.52
SRGAP1-206ENST00000543397 CD28P10747 220 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 APOC4P55056 127 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 RSPO1Q2MKA7 263 aaPredicted RBP5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 SPATA45Q537H7 98 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 IGFL4Q6B9Z1 124 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 C1orf159Q96HA4 380 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 IMMP2LQ96T52 175 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 VSIRQ9H7M9 311 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 MYLKQ15746 1914 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 IGHV3-73A0A0B4J1V6 119 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 TDGF1P3P51864 188 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 MLANAQ16655 118 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 PRORYQ9H606 182 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 C10orf105Q8TEF2 133 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 ORAOV1Q8WV07 137 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 DPH3P1Q9H4G8 78 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 WFDC1Q9HC57 220 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 FNDC10F2Z333 226 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 YPEL3P61236 119 aaPredicted RBP5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 OCC1Q8TAD7 63 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 AGMATQ9BSE5 352 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 SHANK2-AS3Q9BTD1 123 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 KNCNA6PVL3 124 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 DAD1P61803 113 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 ATRAIDQ6UW56 229 aa5.52□□□□□ -1.53
SRGAP1-206ENST00000543397 A0A0G2JRQ6 117 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 MMP23AO75900 390 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 PDE6HQ13956 83 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 GUSBP1Q15486 140 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 Q6ZRM9 215 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 RPP25LQ8N5L8 163 aaKnown RBP5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 TSKUQ8WUA8 353 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 TMEM14BQ9NUH8 114 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 CTSZQ9UBR2 303 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 TMEM213A2RRL7 107 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 NDUFA4O00483 81 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 ZNF876PQ49A33 203 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 Q8NA96 180 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 PIEZO2Q9H5I5 2752 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 RNF138Q8WVD3 245 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 ADAMTS9Q9P2N4 1935 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 SPRY2O43597 315 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 S100A7L2Q5SY68 101 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 GFI1BQ5VTD9 330 aa5.51□□□□□ -1.53
SRGAP1-206ENST00000543397 LTBP2Q14767 1821 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 ATOH7Q8N100 152 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 MRPL27Q9P0M9 148 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 NAV3Q8IVL0 2385 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms