RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CACNA1CQ13936 2221 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 IGHV3OR15-7A0A075B7D8 119 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1D-13A0A0B4J2D9 117 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 TRGV8A0A0C4DH27 118 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 TRBV6-1A0A0K0K1D8 114 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 NCBP2LA6PVI3 153 aaKnown RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 ATOX1O00244 68 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 EFNA2O43921 213 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 TIMM8AO60220 97 aaPredicted RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 IGKCP01834 107 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 IGHV4-34P06331 123 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1-13P0DP09 117 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 CDAP32320 146 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 EDDM3BP56851 147 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 FGF12P61328 243 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 KLRB1Q12918 225 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 RSPO1Q2MKA7 263 aaPredicted RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 DEFB121Q5J5C9 76 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 ZNF493Q6ZR52 646 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 ASCL5Q7RTU5 278 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 TRPT1Q86TN4 253 aaKnown RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 PCP2Q8IVA1 136 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 AMN1Q8IY45 258 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 ABHD12Q8N2K0 398 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 DEFB118Q96PH6 123 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 HIST1H4GQ99525 98 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 TRGV9Q99603 122 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 MGST2Q99735 147 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 EMC6Q9BV81 110 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 MRPL20Q9BYC9 149 aaKnown RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 ZNF355PQ9NSJ1 428 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 EPDR1Q9UM22 224 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 F11RQ9Y624 299 aaKnown RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 U3KQK5 164 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 PCDH15Q96QU1 1955 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 PRRC2BQ5JSZ5 2229 aaKnown RBP4.5□□□□□ -1.69
XRCC4-206ENST00000542685 FER1L5A0AVI2 2057 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 NOTCH3Q9UM47 2321 aa4.5□□□□□ -1.69
XRCC4-206ENST00000542685 SHANK1Q9Y566 2161 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1-27A0A075B6S5 117 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 IGHV5-51A0A0C4DH38 117 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1-12A0A0C4DH73 117 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
XRCC4-206ENST00000542685 H3BT86 120 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 SLC25A20O43772 301 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 IGKV1D-12P01611 117 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 TRACP01848 142 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 P0DMU3 169 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 FAM231AP0DMU4 169 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 FAM231CP0DMU5 169 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 CCL5P13501 91 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 B4GALT1P15291 398 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 PLNP26678 52 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 PSMB8P28062 276 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 PSMB2P49721 201 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 GNG5P63218 68 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 OR1C1Q15619 314 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 DUX4L9Q6RFH8 374 aaPredicted RBP4.49□□□□□ -1.69
XRCC4-206ENST00000542685 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 DRAM1Q8N682 238 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 OR8A1Q8NGG7 326 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 FMC1Q96HJ9 113 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 SRSF8Q9BRL6 282 aaKnown RBP4.49□□□□□ -1.69
XRCC4-206ENST00000542685 PLA2G2FQ9BZM2 168 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 EDA2RQ9HAV5 297 aa4.49□□□□□ -1.69
XRCC4-206ENST00000542685 GOLGA4Q13439 2230 aaKnown RBP4.48□□□□□ -1.69
XRCC4-206ENST00000542685 A0A096LNJ9 63 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 LOC107984640A0A0U1RRK4 108 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 A0A1B0GUT8 65 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 C19orf71A6NCJ1 209 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 PRSS46E5RG02 174 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 LGALS9O00182 355 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 PEX7O00628 323 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 SS18L1O75177 396 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-206ENST00000542685 P01737 135 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 PCBD1P61457 104 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 UBE2L3P68036 154 aaKnown RBP4.48□□□□□ -1.69
XRCC4-206ENST00000542685 GOLT1AQ6ZVE7 132 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 POM121L12Q8N7R1 296 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 DPH3Q96FX2 82 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 HHLA3Q9XRX5 114 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 FOXA2Q9Y261 457 aaPredicted RBP4.48□□□□□ -1.69
XRCC4-206ENST00000542685 SELENOKQ9Y6D0 94 aa4.48□□□□□ -1.69
XRCC4-206ENST00000542685 EML6Q6ZMW3 1958 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 LMO7DNF2Z398 122 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 H3BMM0 161 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 CD7P09564 240 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 GFERP55789 205 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 PAX8Q06710 450 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 PIGYQ3MUY2 71 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 Q5XG85 94 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 MIC13Q5XKP0 118 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 MYO7BQ6PIF6 2116 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 Q6ZR03 302 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 APRG1Q8IVJ8 170 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 MKXQ8IYA7 352 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 RFESDQ8TAC1 157 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms