RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 RPL30P62888 115 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 HLA-DRB3P79483 266 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 ERHP84090 104 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 MEF2BQ02080 365 aaPredicted RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 CKAP4Q07065 602 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 PCLAFQ15004 111 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 P2RY14Q15391 338 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 GLYATQ6IB77 296 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR8G2PQ6IF36 304 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 Q75L30 129 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 LINC00269Q8N2A0 174 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 C15orf56Q8N910 161 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 Q8NBF4 154 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR9Q2Q8NGE9 314 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR1S2Q8NGQ3 325 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 RAB2BQ8WUD1 216 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TCTEX1D2Q8WW35 142 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRUB1Q8WWH5 349 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 UFD1Q92890 307 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 LINC00526Q96FQ7 95 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SGK494Q96LW2 274 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 FAAP24Q9BTP7 215 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SELENOIQ9C0D9 397 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 ZNF331Q9NQX6 463 aaPredicted RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SDR39U1Q9NRG7 319 aaPredicted RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 HAO1Q9UJM8 370 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR51B2Q9Y5P1 312 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TMEM56-RWDD3S4R434 201 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRBV6-6A0A0A6YYG2 114 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRAV8-2A0A0B4J237 113 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGKV1-6A0A0C4DH72 117 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 C7orf71A4D174 169 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRDCB7Z8K6 153 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 ZNF670-ZNF695F2Z2N8 137 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 COPEO14579 308 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 BET1O15155 118 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 NUPR1O60356 82 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC22A5O76082 557 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 CST7O76096 145 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGKV1-39P01597 117 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGKV1D-39P04432 117 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 MT1BP07438 61 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPSAP08865 295 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 MRPL3P09001 348 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 MGST1P10620 155 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 GABRB1P18505 474 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR10J1P30954 320 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 ZNF93P35789 620 aaPredicted RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 SNCAP37840 140 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPL5P46777 297 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 INPP1P49441 399 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPL14P50914 215 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RAB5CP51148 216 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 SUB1P53999 127 aaKnown RBP eCLIP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 TAS2R31P59538 309 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 GINS1Q14691 196 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 POU2AF1Q16633 256 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 PAGE3Q5JUK9 113 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 AADACL3Q5VUY0 350 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 CLPSL2Q6UWE3 100 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR51G1Q8NGK1 321 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR4A4PQ8NGN8 299 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR13C8Q8NGS7 320 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 OR4A16Q8NH70 328 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPUSD4Q96CM3 377 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 RAB3CQ96E17 227 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 ARHGAP5-AS1Q96IT6 56 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 CARD19Q96LW7 228 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 PBDC1Q9BVG4 233 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 PARD6GQ9BYG4 376 aaPredicted RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMBIM4Q9HC24 238 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 ENPP4Q9Y6X5 453 aa0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
TRAV1-1-201ENST00000542354 GVQW2A0A096LPI5 108 aaPredicted RBP0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 TRBV6-7A0A0A0MS04 114 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 DUXBA0A1W2PPF3 345 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 METTL15A6NJ78 407 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMEM212A6NML5 194 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 L7N2F9 121 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 M0R2P5 195 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 GADD45GO95257 159 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGLV6-57P01721 117 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 IGLC1P0CG04 106 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 BCL2P10415 239 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC2A5P22732 501 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 ERVK-16P61578 105 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 VAMP2P63027 116 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 REG3AQ06141 175 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 SYCNQ0VAF6 134 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMED1Q13445 227 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 ZNF266Q14584 549 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 C2orf83Q53S99 150 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 MPV17L2Q567V2 206 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 LAIR2Q6ISS4 152 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMEM182Q6ZP80 229 aaPredicted RBP0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 TMEM252Q8N6L7 170 aa0.95□□□□□ -2.26
TRAV1-1-201ENST00000542354 SLC35G3Q8N808 338 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms