RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PPP1R1CQ8WVI7 109 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 BORCS8Q96FH0 119 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 DPH3Q96FX2 82 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 FAM19A4Q96LR4 140 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 TMEM242Q9NWH2 141 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 Q9Y3F1 56 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 PXMP4Q9Y6I8 212 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 ZNF236Q9UL36 1845 aa2.91□□□□□ -1.94
YBX3-210ENST00000540975 NCKAP5O14513 1909 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 A0A0J9YW62 118 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 CXorf51AA0A1B0GTR3 108 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 IZUMO1RA6ND01 250 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 ZNF727A8MUV8 499 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 TMEM250H0YL14 139 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 FFAR1O14842 300 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 PDCD6O75340 191 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 NAPSAO96009 420 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 IGLV3-25P01717 112 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 CECR9P0C854 216 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 CRYGSP22914 178 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 FAUP35544 74 aaKnown RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 MYCNOSP40205 109 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 GFERP55789 205 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 RPL38P63173 70 aaKnown RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 ZNF90Q03938 601 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 SSBP1Q04837 148 aaKnown RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 ADIGQ0VDE8 80 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 ADIRFQ15847 76 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 RRN3P1Q2M238 152 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 ZNF791Q3KP31 576 aaPredicted RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 SPATA45Q537H7 98 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 RPS19BP1Q86WX3 136 aaKnown RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 PRR15Q8IV56 129 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 C1orf174Q8IYL3 243 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 OR4X2Q8NGF9 303 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 LINC00526Q96FQ7 95 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 SPACA5Q96QH8 159 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 METTL26Q96S19 204 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 ST20Q9HBF5 79 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 OTORQ9NRC9 128 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 C21orf62Q9NYP8 219 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 AK3Q9UIJ7 227 aa2.9□□□□□ -1.95
YBX3-210ENST00000540975 CHCHD2Q9Y6H1 151 aaPredicted RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 CHD3Q12873 2000 aaKnown RBP2.9□□□□□ -1.95
YBX3-210ENST00000540975 TRIP11Q15643 1979 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 TRBV20-1A0A075B6N2 111 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 TRAV27A0A087WT01 109 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 MUC21A0A0G2JKD1 596 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 F8W1H4 67 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 H3BRM9 83 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 UQCRQO14949 82 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 SOCS1O15524 211 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 LYZL6O75951 148 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 SRP19P09132 144 aaKnown RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 PPIBP23284 216 aaKnown RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 DAD1P61803 113 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 SEC11AP67812 179 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 ZNF816Q0VGE8 651 aaPredicted RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 ELOCQ15369 112 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 RTL8BQ17RB0 113 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 FAM78AQ5JUQ0 283 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 BVES-AS1Q5T3Y7 98 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 RPL7L1Q6DKI1 246 aaKnown RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 MORN3Q6PF18 240 aaPredicted RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 CEMP1Q6PRD7 247 aaPredicted RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 Q6ZS92 163 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 AAED1Q7RTV5 226 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 COMMD6Q7Z4G1 85 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 TRAPPC6BQ86SZ2 158 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 VSTM2AQ8TAG5 236 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 RPS4Y2Q8TD47 263 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 C2orf15Q8WU43 125 aaKnown RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 MAL2Q969L2 176 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 TMEM230Q96A57 120 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 FAM3DQ96BQ1 224 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 S100A16Q96FQ6 103 aaKnown RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 GPX7Q96SL4 187 aaPredicted RBP2.89□□□□□ -1.95
YBX3-210ENST00000540975 RNF5Q99942 180 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 RTL8AQ9BWD3 113 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 NMES1Q9C002 83 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 AICDAQ9GZX7 198 aa2.89□□□□□ -1.95
YBX3-210ENST00000540975 PLXNA3P51805 1871 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 CCL15-CCL14A0A0B4J2E2 113 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 C3orf85A0A1B0GTC6 90 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 H3BP45 60 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
YBX3-210ENST00000540975 S100A3P33764 101 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 INSL3P51460 131 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 RPS11P62280 158 aaKnown RBP eCLIP2.88□□□□□ -1.95
YBX3-210ENST00000540975 SPRNQ5BIV9 151 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 CENPWQ5EE01 88 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 UNQ9165/PRO28630Q6UXU0 137 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 ATP5L2Q7Z4Y8 100 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 SLC22A24Q8N4F4 322 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 APCDD1LQ8NCL9 501 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 OR10AC1Q8NH08 325 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 AQP3Q92482 292 aa2.88□□□□□ -1.95
YBX3-210ENST00000540975 TVP23CQ96ET8 276 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms