RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 YPEL4Q96NS1 127 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 U3KQE9 123 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 GATCO43716 136 aaKnown RBP6.38□□□□□ -1.39
CHD4-208ENST00000540960 LTAP01374 205 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 PSMB8P28062 276 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
CHD4-208ENST00000540960 BLCAPP62952 87 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 Q6AWC8 147 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 SIGLEC15Q6ZMC9 328 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 UBE2E2Q96LR5 201 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 DERL1Q9BUN8 251 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 GFRA4Q9GZZ7 299 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
CHD4-208ENST00000540960 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 TRBV20OR9-2A0A075B6H5 130 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 A0A1B0GW15 77 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 A0A1W2PPQ1 181 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 LINC01548A6NM66 108 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 ZNF705GA8MUZ8 300 aaPredicted RBP6.37□□□□□ -1.39
CHD4-208ENST00000540960 DIRC3C9JPN6 131 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
CHD4-208ENST00000540960 P01737 135 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 IGHV3-23P01764 117 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 ID1P41134 155 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 PSG3Q16557 428 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 LEMD1Q68G75 181 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 NDUFA11Q86Y39 141 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 SBSPONQ8IVN8 264 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 BORCS7Q96B45 105 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 DAZ1Q9NQZ3 744 aaKnown RBP6.37□□□□□ -1.39
CHD4-208ENST00000540960 SERTAD4Q9NUC0 356 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 NAT8BQ9UHF3 227 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 LENEPQ9Y5L5 61 aa6.37□□□□□ -1.39
CHD4-208ENST00000540960 TGIF2-C20orf24A0A0A6YYL0 155 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 A0A1W2PRX2 142 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 SMIM27A0A1W2PRY6 76 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 ZNF320A2RRD8 509 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 LGALS9O00182 355 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 C16orf54Q6UWD8 224 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 GOLT1AQ6ZVE7 132 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 COX8CQ7Z4L0 72 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 GBGT1Q8N5D6 347 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 TSKUQ8WUA8 353 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 MLST8Q9BVC4 326 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 ZNF331Q9NQX6 463 aaPredicted RBP6.36□□□□□ -1.39
CHD4-208ENST00000540960 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 S4R3C0 116 aa6.36□□□□□ -1.39
CHD4-208ENST00000540960 TRBV7-9A0A0J9YWB2 115 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 IZUMO1RA6ND01 250 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
CHD4-208ENST00000540960 OVOL1O14753 267 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 LGALS1P09382 135 aaKnown RBP6.35□□□□□ -1.39
CHD4-208ENST00000540960 FAM162BQ5T6X4 162 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 LCN12Q6JVE5 192 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 Q86TA4 180 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 NOL4LQ96MY1 436 aaPredicted RBP6.35□□□□□ -1.39
CHD4-208ENST00000540960 RPP21Q9H633 154 aaKnown RBP6.35□□□□□ -1.39
CHD4-208ENST00000540960 EDA2RQ9HAV5 297 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 PPP1R14DQ9NXH3 145 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 V9GYV3 84 aa6.35□□□□□ -1.39
CHD4-208ENST00000540960 IGHV7-4-1A0A0J9YVY3 117 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 K7EN84 100 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 CXCL1P09341 107 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 CDX1P47902 265 aaPredicted RBP6.34□□□□□ -1.39
CHD4-208ENST00000540960 PAFAH1B2P68402 229 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 TMEM78Q5T7P6 136 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 PRNTQ86SH4 94 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 EXOC3-AS1Q8N2X6 119 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 MYOZ3Q8TDC0 251 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 WIPF2Q8TF74 440 aaPredicted RBP6.34□□□□□ -1.39
CHD4-208ENST00000540960 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 DPF1Q92782 380 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 C16orf92Q96LL3 132 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 PRR25Q96S07 402 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 ZNF702PQ9H963 129 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 NRN1Q9NPD7 142 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 PEMTQ9UBM1 199 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 SMPXQ9UHP9 88 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 LINC00527Q9UJ94 153 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
CHD4-208ENST00000540960 KMT2AQ03164 3969 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 A8MWP6 167 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 CHEK1O14757 476 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 IGLV2-8P01709 118 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 GNG5P63218 68 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 RIGQ13278 110 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 OR5I1Q13606 314 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 SMUG1Q53HV7 270 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 RBPMS2Q6ZRY4 209 aaKnown RBP6.33□□□□□ -1.4
CHD4-208ENST00000540960 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
CHD4-208ENST00000540960 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms