RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TXNDC17Q9BRA2 123 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 PAXXQ9BUH6 204 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 TMEM222Q9H0R3 208 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 VCXQ9H320 206 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 Q9HAA7 133 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 COPZ2Q9P299 210 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 SSR3Q9UNL2 185 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 IGKV1OR2-108A0A075B7D4 117 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 TRAV12-3A0A0B4J271 114 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 RBFOX3A6NFN3 312 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 E5RGE8 158 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 H3BRN7 92 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 VCYO14598 125 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 SULT1A3P0DMM9 295 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 SULT1A4P0DMN0 295 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 CXCL2P19875 107 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 LEPP41159 167 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 TCL1AP56279 114 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 LINC01620Q4KN68 170 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 IBA57Q5T440 356 aaKnown RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 SH2D6Q7Z4S9 175 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 CCDC190Q86UF4 302 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 LHFPL1Q86WI0 220 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 EIF4E3Q8N5X7 224 aaKnown RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 OR1S1Q8NH92 325 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 ZFAND1Q8TCF1 268 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 ZNF431Q8TF32 576 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 BLNKQ8WV28 456 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 SHANK2-AS3Q9BTD1 123 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 PARD6GQ9BYG4 376 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-214ENST00000540865 KLF12Q9Y4X4 402 aa2.99□□□□□ -1.93
SNHG1-214ENST00000540865 IGLV5-37A0A075B6J1 123 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 TRAV8-6A0A0B4J262 113 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 TRGV4A0A0C4DH28 118 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 TEX13DA0A0J9YY54 714 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-214ENST00000540865 CRYM-AS1A6NIL9 109 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 C9JCJ5 164 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 PRAC2D3DTV9 90 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 LECT2O14960 151 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 SLC25A5P05141 298 aaKnown RBP2.98□□□□□ -1.93
SNHG1-214ENST00000540865 CT45A10P0DMU9 189 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 GATA2P23769 480 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-214ENST00000540865 RAB11AP62491 216 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 ZNF846Q147U1 533 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 MEF2DQ14814 521 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 UBE2NLQ5JXB2 153 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 LCN15Q6UWW0 184 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 PQLC2Q6ZP29 291 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 S100A7AQ86SG5 101 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 CROCCP3Q8IVE0 287 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 Q8N976 141 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 LHFPL5Q8TAF8 219 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 GLYATL2Q8WU03 294 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 SLC25A31Q9H0C2 315 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 RBKSQ9H477 322 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-214ENST00000540865 MRPL16Q9NX20 251 aaKnown RBP2.98□□□□□ -1.93
SNHG1-214ENST00000540865 BLOC1S6Q9UL45 172 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 RNF24Q9Y225 148 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 HIGD1AQ9Y241 93 aa2.98□□□□□ -1.93
SNHG1-214ENST00000540865 TRAV8-3A0A0A6YYJ7 113 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 LINC00854A0A1B0GVQ3 168 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 C7orf71A4D174 169 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 RNF222A6NCQ9 220 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 MRPS12O15235 138 aaKnown RBP2.97□□□□□ -1.93
SNHG1-214ENST00000540865 HYPMO75409 117 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 TNFAIP8O95379 198 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 TBPP20226 339 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 PPT1P50897 306 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 CCR6P51684 374 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 PLP1P60201 277 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 SMCO1Q147U7 214 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 CTF1Q16619 201 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 RNASE10Q5GAN6 216 aaKnown RBP2.97□□□□□ -1.93
SNHG1-214ENST00000540865 LELP1Q5T871 98 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 TMEM182Q6ZP80 229 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-214ENST00000540865 ACOT7LQ6ZUV0 252 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 SAMD12Q8N8I0 201 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 HSD17B11Q8NBQ5 300 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 OR10G4Q8NGN3 311 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 OR13C8Q8NGS7 320 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 TERB2Q8NHR7 220 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 SLC50A1Q9BRV3 221 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 NAA60Q9H7X0 242 aa2.97□□□□□ -1.93
SNHG1-214ENST00000540865 SMIM31A0A1B0GVY4 71 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 PMS2P5A8MQ11 134 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 KLLNB2CW77 178 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 MPDU1O75352 247 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 CD3DP04234 171 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IL5P05113 134 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 PFN1P07737 140 aaKnown RBP2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV3-30-3P0DP02 117 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 AKR1C4P17516 323 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 ANXA7P20073 488 aaKnown RBP2.96□□□□□ -1.94
SNHG1-214ENST00000540865 SELENOTP62341 195 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms