RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
DNMT1-203ENST00000540357 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
DNMT1-203ENST00000540357 LINC00574Q9H8X3 128 aa10.3□□□□□ -0.76
DNMT1-203ENST00000540357 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
DNMT1-203ENST00000540357 USF3Q68DE3 2245 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 TNRC6AQ8NDV7 1962 aaKnown RBP10.29□□□□□ -0.76
DNMT1-203ENST00000540357 TRBV7-1A0A0A6YYK4 115 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 A0A0G2JNJ9 132 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 CRYGCP07315 174 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 PAX8Q06710 450 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 Q9UFV3 132 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-203ENST00000540357 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 IGLL5B9A064 214 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 I3L2K1 104 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 IL17RELQ6ZVW7 336 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 RRN3P1Q2M238 152 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 Q6ZS92 163 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
DNMT1-203ENST00000540357 TPRP12270 2363 aaKnown RBP10.28□□□□□ -0.76
DNMT1-203ENST00000540357 BPTFQ12830 3046 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 VCYO14598 125 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 SRSF6Q13247 344 aaKnown RBP10.28□□□□□ -0.76
DNMT1-203ENST00000540357 SPRY4Q9C004 299 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 MRPL36Q9P0J6 103 aaKnown RBP10.28□□□□□ -0.76
DNMT1-203ENST00000540357 E7EUB6 86 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
DNMT1-203ENST00000540357 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 LINC00322Q6ZN03 302 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-203ENST00000540357 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
DNMT1-203ENST00000540357 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.76
DNMT1-203ENST00000540357 C14orf178Q8N769 122 aaPredicted RBP10.27□□□□□ -0.76
DNMT1-203ENST00000540357 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.76
DNMT1-203ENST00000540357 ABHD17AQ96GS6 310 aa10.27□□□□□ -0.76
DNMT1-203ENST00000540357 TSPAN13O95857 204 aa10.27□□□□□ -0.77
DNMT1-203ENST00000540357 CD7P09564 240 aa10.27□□□□□ -0.77
DNMT1-203ENST00000540357 KLRD1Q13241 179 aa10.27□□□□□ -0.77
DNMT1-203ENST00000540357 C1orf229Q6ZS94 237 aaPredicted RBP10.27□□□□□ -0.77
DNMT1-203ENST00000540357 C10orf126Q8N4M7 172 aa10.27□□□□□ -0.77
DNMT1-203ENST00000540357 SMIM2Q9BVW6 85 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 ICE1Q9Y2F5 2266 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 FXYD2P54710 66 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 C1orf159Q96HA4 380 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 SLC25A16P16260 332 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 MYCNOSP40205 109 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 TNFRSF18Q9Y5U5 241 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 RBAKDNA6NC62 111 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 NPFFO15130 113 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 PRTN3P24158 256 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
DNMT1-203ENST00000540357 E7EQL1 145 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 K7EMI3 77 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 RNF182Q8N6D2 247 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 FAM110DQ8TAY7 271 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-203ENST00000540357 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 COL8A2P25067 703 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 C20orf78Q9BR46 151 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 FAM215AQ9Y5M1 114 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 FREM1Q5H8C1 2179 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 THBDP07204 575 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 RITA1Q96K30 269 aa10.25□□□□□ -0.77
DNMT1-203ENST00000540357 COL4A2P08572 1712 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 K7EIM0 57 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 DOCK10Q96BY6 2186 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 CTSZQ9UBR2 303 aa10.24□□□□□ -0.77
DNMT1-203ENST00000540357 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 TRAV41A0A0B4J266 112 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 EFNA4P52798 201 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 PMVKQ15126 192 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 LY6EQ16553 131 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 DKK4Q9UBT3 224 aa10.23□□□□□ -0.77
DNMT1-203ENST00000540357 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 C9JAW5 83 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
DNMT1-203ENST00000540357 MEIG1Q5JSS6 88 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 UTF1Q5T230 341 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 ODF1Q14990 250 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 MSMPQ1L6U9 139 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 EML6Q6ZMW3 1958 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 FAM223BA6NKX1 122 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 FAM223AQ8IWN6 122 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 ZDBF2Q9HCK1 2354 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 ZNF688P0C7X2 276 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
DNMT1-203ENST00000540357 M0R2P5 195 aa10.21□□□□□ -0.77
DNMT1-203ENST00000540357 IGKV3-20P01619 116 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms