RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 RGS13O14921 159 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 ENKURQ8TC29 256 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 S100ZQ8WXG8 99 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 NPCDR1Q9BY65 106 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 C11orf1Q9H5F2 150 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 NMBP08949 121 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
UBE3B-211ENST00000539843 CSN1S1P47710 185 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 Q6ZTI0 123 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 LINC00467Q9BRT7 94 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 Q9H3A6 140 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
UBE3B-211ENST00000539843 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
UBE3B-211ENST00000539843 PKHD1P08F94 4074 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 KLLNB2CW77 178 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 E5RGE8 158 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 PYYP10082 97 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 HOXA5P20719 270 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
UBE3B-211ENST00000539843 ERCC8Q13216 396 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 ICAM4Q14773 271 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 LINC00299Q6ZSB3 139 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 OR5C1Q8NGR4 320 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 C18orf15Q96N68 181 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 MRPL32Q9BYC8 188 aaKnown RBP10.63□□□□□ -0.71
UBE3B-211ENST00000539843 FUT9Q9Y231 359 aa10.63□□□□□ -0.71
UBE3B-211ENST00000539843 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 SLAQ13239 276 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 BTN1A1Q13410 526 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 IBA57Q5T440 356 aaKnown RBP10.62□□□□□ -0.71
UBE3B-211ENST00000539843 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 THAP6Q8TBB0 222 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 OR51M1Q9H341 326 aa10.62□□□□□ -0.71
UBE3B-211ENST00000539843 NDUFB4O95168 129 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 PET100P0DJ07 73 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 CRISP2P16562 243 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 TCL1AP56279 114 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 IL15RAQ13261 267 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 ESRGQ1W209 222 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
UBE3B-211ENST00000539843 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 EREGO14944 169 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 PAX4O43316 350 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 OR7C2O60412 319 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 PRAF2O60831 178 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 CD300CQ08708 224 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 ASAH1Q13510 395 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 SPATA12Q7Z6I5 190 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 SLC25A2Q9BXI2 301 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 NMES1Q9C002 83 aa10.6□□□□□ -0.71
UBE3B-211ENST00000539843 IGKV2-40A0A087WW87 121 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-211ENST00000539843 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 SPINK4O60575 86 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-211ENST00000539843 IGKV2D-40P01614 121 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-211ENST00000539843 ZNF138P52744 262 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 TAS2R45P59539 299 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 NHLH2Q02577 135 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 MIR17HGQ75NE6 70 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 FAM19A4Q96LR4 140 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 PTTG2Q9NZH5 202 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 ZNF492Q9P255 531 aa10.59□□□□□ -0.71
UBE3B-211ENST00000539843 A0A096LPF7 62 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 SIVA1O15304 175 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 OR10J4P0C629 311 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 PCNPQ8WW12 178 aaKnown RBP10.58□□□□□ -0.72
UBE3B-211ENST00000539843 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
UBE3B-211ENST00000539843 PRO0255Q9UI72 69 aa10.58□□□□□ -0.72
UBE3B-211ENST00000539843 DYNC1H1Q14204 4646 aaKnown RBP10.57□□□□□ -0.72
UBE3B-211ENST00000539843 PKD1P98161 4303 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 IFNA5P01569 189 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 UBE2L3P68036 154 aaKnown RBP10.57□□□□□ -0.72
UBE3B-211ENST00000539843 KHDC3LQ587J8 217 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 SCGB1C1Q8TD33 95 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 ATP5SQ99766 215 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 VGLL1Q99990 258 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 KLF12Q9Y4X4 402 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 MUC4Q99102 2169 aa10.57□□□□□ -0.72
UBE3B-211ENST00000539843 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 SIX6O95475 246 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms