RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RPL19P84098 196 aaKnown RBP17.06■□□□□ 0.32
HOMER3-204ENST00000539827 C20orf173Q96LM9 149 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 MRPL18Q9H0U6 180 aaKnown RBP17.06■□□□□ 0.32
HOMER3-204ENST00000539827 UFC1Q9Y3C8 167 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 ACANP16112 2415 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 GZMBP10144 247 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 CT83Q5H943 113 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 SAPCD1Q5SSQ6 148 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 DNLZQ5SXM8 178 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 GPR61Q9BZJ8 451 aa17.06■□□□□ 0.32
HOMER3-204ENST00000539827 ANK3Q12955 4377 aaKnown RBP17.05■□□□□ 0.32
HOMER3-204ENST00000539827 FBLL1A6NHQ2 334 aaKnown RBP17.05■□□□□ 0.32
HOMER3-204ENST00000539827 CT45A10P0DMU9 189 aa17.05■□□□□ 0.32
HOMER3-204ENST00000539827 GFI1BQ5VTD9 330 aa17.05■□□□□ 0.32
HOMER3-204ENST00000539827 OR4B1Q8NGF8 309 aa17.05■□□□□ 0.32
HOMER3-204ENST00000539827 GTSF1Q8WW33 167 aa17.05■□□□□ 0.32
HOMER3-204ENST00000539827 MRPL53Q96EL3 112 aaKnown RBP17.05■□□□□ 0.32
HOMER3-204ENST00000539827 RAB4BP61018 213 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 OR10D4PQ8NGN7 298 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 SRD5A1P18405 259 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 SYNJ2BPP57105 145 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 HIST2H2BDQ6DRA6 164 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 TMEM136Q6ZRR5 245 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 GNB1LQ9BYB4 327 aa17.04■□□□□ 0.32
HOMER3-204ENST00000539827 RBAKDNA6NC62 111 aa17.03■□□□□ 0.32
HOMER3-204ENST00000539827 SOCS3O14543 225 aa17.03■□□□□ 0.32
HOMER3-204ENST00000539827 PGLYRP4Q96LB8 373 aa17.03■□□□□ 0.32
HOMER3-204ENST00000539827 AGPAT4-IT1Q9H0P7 198 aa17.03■□□□□ 0.32
HOMER3-204ENST00000539827 TMEM213A2RRL7 107 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 XKRY2A2RUG3 117 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 SH2D1AO60880 128 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 TCTEX1D4Q5JR98 221 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 ZNF738Q8NE65 137 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 NRN1Q9NPD7 142 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 GSN-AS1Q9NRJ2 163 aa17.02■□□□□ 0.32
HOMER3-204ENST00000539827 HOXD3P31249 432 aaPredicted RBP17.02■□□□□ 0.31
HOMER3-204ENST00000539827 ZNF80P51504 273 aaPredicted RBP17.02■□□□□ 0.31
HOMER3-204ENST00000539827 DEFB136Q30KP8 78 aa17.02■□□□□ 0.31
HOMER3-204ENST00000539827 PDZD11Q5EBL8 140 aa17.02■□□□□ 0.31
HOMER3-204ENST00000539827 WDR73Q6P4I2 378 aa17.02■□□□□ 0.31
HOMER3-204ENST00000539827 NDFIP1Q9BT67 221 aa17.02■□□□□ 0.31
HOMER3-204ENST00000539827 PYY3Q5JQD4 70 aa17.01■□□□□ 0.31
HOMER3-204ENST00000539827 KHDC1LQ5JSQ8 128 aa17.01■□□□□ 0.31
HOMER3-204ENST00000539827 COX8CQ7Z4L0 72 aa17.01■□□□□ 0.31
HOMER3-204ENST00000539827 CLEC5AQ9NY25 188 aa17.01■□□□□ 0.31
HOMER3-204ENST00000539827 ZNF705DP0CH99 300 aaPredicted RBP17■□□□□ 0.31
HOMER3-204ENST00000539827 ZNF705BP0CI00 300 aaPredicted RBP17■□□□□ 0.31
HOMER3-204ENST00000539827 FABP4P15090 132 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 FAM162BQ5T6X4 162 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 REC114Q7Z4M0 266 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 GFRA4Q9GZZ7 299 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 LY6G6DO95868 133 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 COX19Q49B96 90 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 PACRGQ96M98 296 aaPredicted RBP17■□□□□ 0.31
HOMER3-204ENST00000539827 HIST1H2BLQ99880 126 aa17■□□□□ 0.31
HOMER3-204ENST00000539827 DEFB1P60022 68 aa16.99■□□□□ 0.31
HOMER3-204ENST00000539827 GDF5OSQ5U4N7 250 aa16.99■□□□□ 0.31
HOMER3-204ENST00000539827 TMSB15BA0A087X1C1 80 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 SLURP1P55000 103 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 KIAA1644Q3SXP7 199 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 TMEM78Q5T7P6 136 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 RBPMS2Q6ZRY4 209 aaKnown RBP16.98■□□□□ 0.31
HOMER3-204ENST00000539827 WFDC3Q8IUB2 231 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 TMEM160Q9NX00 188 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 MT-ND6P03923 174 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 CAMPP49913 170 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 ZNF138P52744 262 aa16.98■□□□□ 0.31
HOMER3-204ENST00000539827 WIPF2Q8TF74 440 aaPredicted RBP16.98■□□□□ 0.31
HOMER3-204ENST00000539827 TMEM189A5PLL7 270 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 LGALS9O00182 355 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 SCGB2A2Q13296 93 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 C9orf47Q6ZRZ4 202 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 DUX3Q96PT4 197 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 MYO9AB2RTY4 2548 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 FAM231BA6NCW3 169 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 A8MWP6 167 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 HLA-DQA1P01909 254 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 RNASE1P07998 156 aaKnown RBP16.97■□□□□ 0.31
HOMER3-204ENST00000539827 BMI1P35226 326 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 PRR31Q5SQ13 230 aa16.97■□□□□ 0.31
HOMER3-204ENST00000539827 A0A1B0GUS0 222 aa16.96■□□□□ 0.31
HOMER3-204ENST00000539827 A0A1B0GXF2 115 aa16.96■□□□□ 0.31
HOMER3-204ENST00000539827 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.31
HOMER3-204ENST00000539827 RASL11AQ6T310 242 aa16.96■□□□□ 0.31
HOMER3-204ENST00000539827 ZNF418Q8TF45 676 aaPredicted RBP16.96■□□□□ 0.31
HOMER3-204ENST00000539827 CYSRT1A8MQ03 144 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 LINC01619G3V211 115 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 CTAG1AP78358 180 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 KLF5Q13887 457 aaPredicted RBP16.95■□□□□ 0.3
HOMER3-204ENST00000539827 ATP5L2Q7Z4Y8 100 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 OR11H1Q8NG94 326 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 C4orf3Q8WVX3 66 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 APCSP02743 223 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 TFPI2P48307 235 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 C11orf44Q8N8P7 122 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 KLHL30-AS1Q8NEE0 82 aa16.95■□□□□ 0.3
HOMER3-204ENST00000539827 C2orf70A6NJV1 201 aa16.94■□□□□ 0.3
HOMER3-204ENST00000539827 OVOL1O14753 267 aa16.94■□□□□ 0.3
HOMER3-204ENST00000539827 FOXA3P55318 350 aaPredicted RBP16.94■□□□□ 0.3
HOMER3-204ENST00000539827 OR1N2Q8NGR9 330 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms