RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CEND1Q8N111 149 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 TRBV25-1A0A075B6N4 114 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 E9PLD3 99 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 TCF15Q12870 199 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 TAL2Q16559 108 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 SVIPQ8NHG7 77 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 RNF185Q96GF1 192 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 C18orf15Q96N68 181 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 CHD8Q9HCK8 2581 aa13.77□□□□□ -0.2
RAB40C-205ENST00000539661 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-205ENST00000539661 DPM2O94777 84 aa13.77□□□□□ -0.21
RAB40C-205ENST00000539661 AZU1P20160 251 aa13.77□□□□□ -0.21
RAB40C-205ENST00000539661 GNG7O60262 68 aa13.76□□□□□ -0.21
RAB40C-205ENST00000539661 PRSS1P07477 247 aa13.76□□□□□ -0.21
RAB40C-205ENST00000539661 WFDC3Q8IUB2 231 aa13.76□□□□□ -0.21
RAB40C-205ENST00000539661 ZNF48Q96MX3 618 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-205ENST00000539661 CNIH1O95406 144 aa13.75□□□□□ -0.21
RAB40C-205ENST00000539661 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
RAB40C-205ENST00000539661 SPANXB1Q9NS25 103 aaPredicted RBP13.75□□□□□ -0.21
RAB40C-205ENST00000539661 NHP2Q9NX24 153 aaKnown RBP13.75□□□□□ -0.21
RAB40C-205ENST00000539661 IGKV2-40A0A087WW87 121 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-205ENST00000539661 A0A1W2PRD5 423 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 A0A1W2PRF3 423 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 A0A1W2PRM7 423 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 K7ERJ3 54 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 ZNF207O43670 478 aaKnown RBP13.74□□□□□ -0.21
RAB40C-205ENST00000539661 TNFRSF6BO95407 300 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 IGKV2D-40P01614 121 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-205ENST00000539661 RPEQ96AT9 228 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 GAGE12HA6NDE8 117 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 IGLL5B9A064 214 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 PRB4P10163 310 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-205ENST00000539661 RPL7P18124 248 aaKnown RBP13.74□□□□□ -0.21
RAB40C-205ENST00000539661 SPATA25Q9BR10 227 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 MALRD1Q5VYJ5 2156 aa13.74□□□□□ -0.21
RAB40C-205ENST00000539661 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 ZC2HC1BQ5TFG8 222 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 Q8N8P6 123 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 FOXC2Q99958 501 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 GTSF1LQ9H1H1 148 aa13.73□□□□□ -0.21
RAB40C-205ENST00000539661 RALYQ9UKM9 306 aaKnown RBP13.73□□□□□ -0.21
RAB40C-205ENST00000539661 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-205ENST00000539661 GTSCR1Q86UQ5 136 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 TPRP12270 2363 aaKnown RBP13.72□□□□□ -0.21
RAB40C-205ENST00000539661 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 MFAP4P55083 255 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 BSPH1Q075Z2 132 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 GFRALQ6UXV0 394 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 RNASE6Q93091 150 aaKnown RBP13.72□□□□□ -0.21
RAB40C-205ENST00000539661 ZNF479Q96JC4 524 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 PSMG3-AS1Q96PY0 264 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 TTTY13Q9BZ97 58 aa13.72□□□□□ -0.21
RAB40C-205ENST00000539661 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-205ENST00000539661 A0A1B0GV72 72 aa13.71□□□□□ -0.21
RAB40C-205ENST00000539661 NPIPB5A8MRT5 1133 aa13.71□□□□□ -0.21
RAB40C-205ENST00000539661 IGFL3Q6UXB1 125 aa13.71□□□□□ -0.21
RAB40C-205ENST00000539661 TMEM158Q8WZ71 300 aa13.71□□□□□ -0.21
RAB40C-205ENST00000539661 TMEM8BA6NDV4 472 aa13.71□□□□□ -0.22
RAB40C-205ENST00000539661 FABP5P3A8MUU1 101 aa13.71□□□□□ -0.22
RAB40C-205ENST00000539661 LY6LH3BQJ8 138 aa13.71□□□□□ -0.22
RAB40C-205ENST00000539661 ZNF502Q8TBZ5 544 aa13.7□□□□□ -0.22
RAB40C-205ENST00000539661 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
RAB40C-205ENST00000539661 PRSS47A8MTI9 375 aa13.7□□□□□ -0.22
RAB40C-205ENST00000539661 SMAGPQ0VAQ4 97 aa13.7□□□□□ -0.22
RAB40C-205ENST00000539661 WFDC2Q14508 124 aa13.7□□□□□ -0.22
RAB40C-205ENST00000539661 IGLV2-18A0A075B6J9 118 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 LINC01619G3V211 115 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 ORM1P02763 201 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 FAM57AQ8TBR7 257 aa13.69□□□□□ -0.22
RAB40C-205ENST00000539661 PTPRQQ9UMZ3 2332 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 Q8TAT8 98 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 ATP6V0BQ99437 205 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 ABCA1O95477 2261 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 IGLV11-55A0A075B6I3 123 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 NBR2O15453 112 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 MYOZ3Q8TDC0 251 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 ARPC1AQ92747 370 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 DYNLRB1Q9NP97 96 aa13.68□□□□□ -0.22
RAB40C-205ENST00000539661 DLX1P56177 255 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 NPBQ8NG41 125 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 IGFBPL1Q8WX77 278 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 COX7A1P24310 79 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 Q6ZS92 163 aa13.67□□□□□ -0.22
RAB40C-205ENST00000539661 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 SCGB2A1O75556 95 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 NDUFA3O95167 84 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 IGHG4P01861 327 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 PLNP26678 52 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 GAGE13Q4V321 117 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 DTX2Q86UW9 622 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 MRPL35Q9NZE8 188 aaKnown RBP13.66□□□□□ -0.22
RAB40C-205ENST00000539661 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 A0A087WX48 190 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms