RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
CACNB1-206ENST00000539338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNB1-206ENST00000539338 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 ZNF415Q09FC8 603 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 FGF23Q9GZV9 251 aaPredicted RBP11.59□□□□□ -0.55
CACNB1-206ENST00000539338 UBE2E1P51965 193 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 DKK1O94907 266 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
CACNB1-206ENST00000539338 KIAA1671Q9BY89 1806 aa11.59□□□□□ -0.55
CACNB1-206ENST00000539338 SSBP2P81877 361 aaPredicted RBP11.58□□□□□ -0.56
CACNB1-206ENST00000539338 FAM104BQ5XKR9 115 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
CACNB1-206ENST00000539338 SHISA2Q6UWI4 295 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 IGHV2-70P01814 119 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 CT83Q5H943 113 aa11.58□□□□□ -0.56
CACNB1-206ENST00000539338 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
CACNB1-206ENST00000539338 FAM231BA6NCW3 169 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
CACNB1-206ENST00000539338 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
CACNB1-206ENST00000539338 SMIM27A0A1W2PRY6 76 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 PRSS46E5RG02 174 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 FAM120AOSQ5T036 256 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 LINC00311Q8N616 119 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
CACNB1-206ENST00000539338 CD5LO43866 347 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 C11orf53Q8IXP5 236 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
CACNB1-206ENST00000539338 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 SPXQ9BT56 116 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
CACNB1-206ENST00000539338 KNCNA6PVL3 124 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 ESDP10768 282 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 COX11Q9Y6N1 276 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 DEFB131AP59861 70 aa11.56□□□□□ -0.56
CACNB1-206ENST00000539338 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 IGHV2-70DA0A0C4DH43 119 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 H3BRN7 92 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 MRPL51Q4U2R6 128 aaKnown RBP11.55□□□□□ -0.56
CACNB1-206ENST00000539338 LYPD6BQ8NI32 183 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR25Q96S07 402 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRADC1Q9BSG0 188 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PLXNB3Q9ULL4 1909 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 GAGE12BA1L429 117 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 K7EN84 100 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR20EP86478 221 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR20CP86479 221 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR20DP86480 221 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR20BP86481 221 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 PRR20AP86496 221 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 ATXN8Q156A1 80 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 KLK5Q9Y337 293 aaPredicted RBP11.55□□□□□ -0.56
CACNB1-206ENST00000539338 TSSC4Q9Y5U2 329 aaPredicted RBP11.55□□□□□ -0.56
CACNB1-206ENST00000539338 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 IGLC3P0DOY3 106 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 C11orf52Q96A22 123 aa11.55□□□□□ -0.56
CACNB1-206ENST00000539338 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 SPINK13Q1W4C9 94 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 C8orf86Q6ZUL3 223 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 COL4A4P53420 1690 aaPredicted RBP11.54□□□□□ -0.56
CACNB1-206ENST00000539338 TMEM86BQ8N661 226 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 NOTCH2Q04721 2471 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 SLC25A20O43772 301 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 INSP01308 110 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 KLK9Q9UKQ9 250 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
CACNB1-206ENST00000539338 WT1P19544 449 aaPredicted RBP11.53□□□□□ -0.56
CACNB1-206ENST00000539338 A0A087WX48 190 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 CRPP02741 224 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 CKS1BP61024 79 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
CACNB1-206ENST00000539338 IGLL1P15814 213 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 ADORA2A-AS1P86434 159 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 PAX4O43316 350 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 TIMM21Q9BVV7 248 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 TMEM14CQ9P0S9 112 aa11.53□□□□□ -0.56
CACNB1-206ENST00000539338 THAP8Q8NA92 274 aa11.52□□□□□ -0.56
CACNB1-206ENST00000539338 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.56
CACNB1-206ENST00000539338 LYPD6Q86Y78 171 aa11.52□□□□□ -0.57
CACNB1-206ENST00000539338 GATD1Q8NB37 220 aa11.52□□□□□ -0.57
CACNB1-206ENST00000539338 RNF138Q8WVD3 245 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms