RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 IL4P05112 153 aa14.56□□□□□ -0.08
SFSWAP-207ENST00000538548 IGHV1-8P0DP01 117 aa14.56□□□□□ -0.08
SFSWAP-207ENST00000538548 TCTEX1D4Q5JR98 221 aa14.56□□□□□ -0.08
SFSWAP-207ENST00000538548 FOXC2Q99958 501 aa14.56□□□□□ -0.08
SFSWAP-207ENST00000538548 RAB9AP51151 201 aa14.56□□□□□ -0.08
SFSWAP-207ENST00000538548 C12orf74Q32Q52 190 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 TMEM155Q4W5P6 130 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 PRR25Q96S07 402 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 MALRD1Q5VYJ5 2156 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 TMEM8BA6NDV4 472 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 K7EIM0 57 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 CD40P25942 277 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 LOXP28300 417 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 CKS1BP61024 79 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 GAGE13Q4V321 117 aa14.55□□□□□ -0.08
SFSWAP-207ENST00000538548 C16orf97H3BN30 126 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 TNFRSF6BO95407 300 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 LYPD2Q6UXB3 125 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 C17orf100A8MU93 164 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 TMEM178BH3BS89 294 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 K7EMI3 77 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 NUP37Q8NFH4 326 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
SFSWAP-207ENST00000538548 SPTA1P02549 2419 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 IGFL2Q6UWQ7 119 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 FBXL15Q9H469 300 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 PRO0461Q9UI25 63 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 NBASA2RRP1 2371 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 TNFRSF13BO14836 293 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 ASCL5Q7RTU5 278 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 MSRB1Q9NZV6 116 aa14.53□□□□□ -0.08
SFSWAP-207ENST00000538548 IGKV2-40A0A087WW87 121 aaPredicted RBP14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 GAS8-AS1O95177 125 aa14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 IGKV2D-40P01614 121 aaPredicted RBP14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 TTC9CQ8N5M4 171 aa14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 TMEM158Q8WZ71 300 aa14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 SRSF8Q9BRL6 282 aaKnown RBP14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 CTSZQ9UBR2 303 aa14.52□□□□□ -0.08
SFSWAP-207ENST00000538548 RRN3P1Q2M238 152 aa14.52□□□□□ -0.09
SFSWAP-207ENST00000538548 AMTNQ6UX39 209 aa14.52□□□□□ -0.09
SFSWAP-207ENST00000538548 TMEM160Q9NX00 188 aa14.52□□□□□ -0.09
SFSWAP-207ENST00000538548 AGRNO00468 2067 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 TRAV40A0A0B4J280 105 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 IGHV1-3A0A0C4DH29 117 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 SRSF2Q01130 221 aaKnown RBP14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 SCGB2A2Q13296 93 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 C22orf34Q6ZV56 151 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 NCOR2Q9Y618 2525 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 TMEM238LA0A1B0GVL6 79 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 ZNF80P51504 273 aaPredicted RBP14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 TMEM108Q6UXF1 575 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 ZNF575Q86XF7 245 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 MAPKAPK5-AS1Q8N8E1 139 aa14.51□□□□□ -0.09
SFSWAP-207ENST00000538548 Q8N8P6 123 aa14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 CCL17Q92583 94 aa14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 Q5PR19 223 aa14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 MRPL35Q9NZE8 188 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 TLN1Q9Y490 2541 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-207ENST00000538548 HIST1H4GQ99525 98 aa14.49□□□□□ -0.09
SFSWAP-207ENST00000538548 IGLV1-47P01700 117 aa14.49□□□□□ -0.09
SFSWAP-207ENST00000538548 INSL3P51460 131 aa14.49□□□□□ -0.09
SFSWAP-207ENST00000538548 Q8TAT8 98 aa14.49□□□□□ -0.09
SFSWAP-207ENST00000538548 RAB1BQ9H0U4 201 aa14.49□□□□□ -0.09
SFSWAP-207ENST00000538548 A0A1B0GWB2 263 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 KALRNO60229 2985 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 DEFB109BQ30KR1 87 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 PRRG2O14669 202 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 ATP5G2Q06055 141 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 ADIPOQQ15848 244 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 KAAG1Q9UBP8 84 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 FAM215AQ9Y5M1 114 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 TPRP12270 2363 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 PCNX1Q96RV3 2341 aa14.48□□□□□ -0.09
SFSWAP-207ENST00000538548 IGLV2-18A0A075B6J9 118 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 CNIH1O95406 144 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 ORM1P02763 201 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 FAM27E3Q08E93 113 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 PSMG3-AS1Q96PY0 264 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 ATRXP46100 2492 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 NCBP2LA6PVI3 153 aaKnown RBP14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 MTURNQ8N3F0 131 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 MYOZ3Q8TDC0 251 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 ROS1P08922 2347 aa14.47□□□□□ -0.09
SFSWAP-207ENST00000538548 TRBV7-3A0A075B6L6 115 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 LINC01619G3V211 115 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 BUB1B-PAK6H3BSN5 160 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 MRPL16Q9NX20 251 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 A0A087WX48 190 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 APOMO95445 188 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 GATA1P15976 413 aaPredicted RBP14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 RNF5Q99942 180 aa14.46□□□□□ -0.09
SFSWAP-207ENST00000538548 TRAV26-1A0A087WT03 109 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 RPL7P18124 248 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 PLNP26678 52 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 DTX2Q86UW9 622 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 Q6ZS92 163 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 FABP5P3A8MUU1 101 aa14.45□□□□□ -0.1
SFSWAP-207ENST00000538548 DLX1P56177 255 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms