RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 A0A087X0K7 114 aa19.19■□□□□ 0.66
RAB40C-204ENST00000538492 FBLL1A6NHQ2 334 aaKnown RBP19.19■□□□□ 0.66
RAB40C-204ENST00000538492 ORM1P02763 201 aa19.19■□□□□ 0.66
RAB40C-204ENST00000538492 PRSS3P2Q8NHM4 247 aa19.19■□□□□ 0.66
RAB40C-204ENST00000538492 LOC389332A0A1B0GUA5 103 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 FER1L6-AS1Q8NA97 138 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 METTL26Q96S19 204 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 UTP20O75691 2785 aaKnown RBP19.18■□□□□ 0.66
RAB40C-204ENST00000538492 IGHV4-38-2P0DP08 117 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 TWIST1Q15672 202 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 FAM104BQ5XKR9 115 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 ZNF575Q86XF7 245 aa19.18■□□□□ 0.66
RAB40C-204ENST00000538492 OR5AL1P0C617 328 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 IFI27P40305 119 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-204ENST00000538492 LY6EQ16553 131 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 FAM106AQ4KMX7 169 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 IL17RELQ6ZVW7 336 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 IGSF10Q6WRI0 2623 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 FA2HQ7L5A8 372 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 MAP1LC3CQ9BXW4 147 aa19.17■□□□□ 0.66
RAB40C-204ENST00000538492 C10orf105Q8TEF2 133 aa19.16■□□□□ 0.66
RAB40C-204ENST00000538492 CACNA1AO00555 2505 aa19.16■□□□□ 0.66
RAB40C-204ENST00000538492 TRGV3P03979 118 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 TSPOP30536 169 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 TFPI2P48307 235 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 PRELID3AQ96N28 172 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 SLC50A1Q9BRV3 221 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 hDV102S1A0JD36 115 aa19.15■□□□□ 0.66
RAB40C-204ENST00000538492 CSMD2Q7Z408 3487 aa19.14■□□□□ 0.66
RAB40C-204ENST00000538492 FABP5P3A8MUU1 101 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 IGLC6P0CF74 106 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 ZNF25P17030 456 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-204ENST00000538492 ATP5J2P56134 94 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 RPS20P60866 119 aaKnown RBP19.14■□□□□ 0.65
RAB40C-204ENST00000538492 MRPL51Q4U2R6 128 aaKnown RBP19.14■□□□□ 0.65
RAB40C-204ENST00000538492 MSRB1Q9NZV6 116 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 TP73-AS1Q9UF72 201 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 HSPB8Q9UJY1 196 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 LAMTOR2Q9Y2Q5 125 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 IGHV4-30-2A0A087WSY4 118 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 TRAV8-2A0A0B4J237 113 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 C20orf202A1L168 122 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 PMCHL2Q9BQD1 86 aa19.14■□□□□ 0.65
RAB40C-204ENST00000538492 USP9XQ93008 2570 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-204ENST00000538492 SMKR1H3BMG3 65 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 LOXL1Q08397 574 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-204ENST00000538492 C19orf54Q5BKX5 351 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 C8orf86Q6ZUL3 223 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 ORMDL3Q8N138 153 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 CLEC2AQ6UVW9 174 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 SIGLEC8Q9NYZ4 499 aa19.13■□□□□ 0.65
RAB40C-204ENST00000538492 PPIFP30405 207 aaKnown RBP19.12■□□□□ 0.65
RAB40C-204ENST00000538492 DMRTA1Q5VZB9 504 aa19.12■□□□□ 0.65
RAB40C-204ENST00000538492 AGPAT4-IT1Q9H0P7 198 aa19.12■□□□□ 0.65
RAB40C-204ENST00000538492 U3KQK5 164 aa19.12■□□□□ 0.65
RAB40C-204ENST00000538492 TRBV12-3P01733 135 aa19.11■□□□□ 0.65
RAB40C-204ENST00000538492 TMEM191AQ9H0A3 160 aa19.11■□□□□ 0.65
RAB40C-204ENST00000538492 STPG4Q8N801 248 aa19.11■□□□□ 0.65
RAB40C-204ENST00000538492 OR10AG1Q8NH19 301 aa19.11■□□□□ 0.65
RAB40C-204ENST00000538492 RBAKDNA6NC62 111 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 FAM223BA6NKX1 122 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 H3BUX3 64 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 NCR2O95944 276 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 ARL3P36405 182 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 FXYD7P58549 80 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 COL5A1-AS1Q5SY13 56 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 FAM223AQ8IWN6 122 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 MEGF9Q9H1U4 602 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 DOPEY1Q5JWR5 2465 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 CKS2P33552 79 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 PET117Q6UWS5 81 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 U3KQE9 123 aa19.1■□□□□ 0.65
RAB40C-204ENST00000538492 ZNF747Q9BV97 191 aa19.09■□□□□ 0.65
RAB40C-204ENST00000538492 PSMG3-AS1Q96PY0 264 aa19.09■□□□□ 0.65
RAB40C-204ENST00000538492 HINT1P49773 126 aaPredicted RBP19.08■□□□□ 0.65
RAB40C-204ENST00000538492 UNQ9165/PRO28630Q6UXU0 137 aa19.08■□□□□ 0.65
RAB40C-204ENST00000538492 A0A096LNJ9 63 aa19.08■□□□□ 0.64
RAB40C-204ENST00000538492 TMEM78Q5T7P6 136 aa19.08■□□□□ 0.64
RAB40C-204ENST00000538492 CYB5R2Q6BCY4 276 aa19.08■□□□□ 0.64
RAB40C-204ENST00000538492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.08■□□□□ 0.644e-6■■■■□ 21.3
RAB40C-204ENST00000538492 NPYP01303 97 aa19.07■□□□□ 0.64
RAB40C-204ENST00000538492 NDUFS8O00217 210 aa19.07■□□□□ 0.64
RAB40C-204ENST00000538492 IGHV3-11P01762 117 aa19.07■□□□□ 0.64
RAB40C-204ENST00000538492 CRIP2P52943 208 aaPredicted RBP19.07■□□□□ 0.64
RAB40C-204ENST00000538492 SRSF2Q01130 221 aaKnown RBP19.07■□□□□ 0.64
RAB40C-204ENST00000538492 LINC01559Q495D7 138 aa19.07■□□□□ 0.64
RAB40C-204ENST00000538492 C11orf21Q9P2W6 132 aa19.07■□□□□ 0.64
RAB40C-204ENST00000538492 MRPS16Q9Y3D3 137 aaKnown RBP19.07■□□□□ 0.64
RAB40C-204ENST00000538492 C16orf92Q96LL3 132 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 TMEM208Q9BTX3 173 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 IGKV3D-20A0A0C4DH25 116 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 BLCAPP62952 87 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 Q6ZQT7 251 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 Q6ZS46 218 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 ST20Q9HBF5 79 aa19.06■□□□□ 0.64
RAB40C-204ENST00000538492 NRGNQ92686 78 aa19.05■□□□□ 0.64
RAB40C-204ENST00000538492 MYO18BQ8IUG5 2567 aa19.05■□□□□ 0.64
RAB40C-204ENST00000538492 SMAD7O15105 426 aaKnown RBP19.05■□□□□ 0.64
RAB40C-204ENST00000538492 IGF1P05019 195 aa19.05■□□□□ 0.64
RAB40C-204ENST00000538492 MSMBP08118 114 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms