RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
SMG6-203ENST00000536871 ABCA1O95477 2261 aa10.45□□□□□ -0.74
SMG6-203ENST00000536871 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
SMG6-203ENST00000536871 IGHG4P01861 327 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 IGLC3P0DOY3 106 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 PF4V1P10720 104 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
SMG6-203ENST00000536871 BATFQ16520 125 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 PRSS57Q6UWY2 283 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 ZNF493Q6ZR52 646 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 C8orf49Q96NF6 230 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 LRBAP50851 2863 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 TGFAP01135 160 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 CFHR3Q02985 330 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 TMEM78Q5T7P6 136 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 C8orf86Q6ZUL3 223 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 STPG4Q8N801 248 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
SMG6-203ENST00000536871 TMEM238LA0A1B0GVL6 79 aa10.43□□□□□ -0.74
SMG6-203ENST00000536871 K7EMT4 169 aa10.43□□□□□ -0.74
SMG6-203ENST00000536871 AVPP01185 164 aa10.43□□□□□ -0.74
SMG6-203ENST00000536871 HIST1H1AQ02539 215 aaPredicted RBP10.43□□□□□ -0.74
SMG6-203ENST00000536871 SRSF1Q07955 248 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMG6-203ENST00000536871 C9orf47Q6ZRZ4 202 aa10.43□□□□□ -0.74
SMG6-203ENST00000536871 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
SMG6-203ENST00000536871 NPFFR1Q9GZQ6 430 aa10.43□□□□□ -0.74
SMG6-203ENST00000536871 F2Z2F3 143 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 TFPI2P48307 235 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 ZNF138P52744 262 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 BLCAPP62952 87 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 VGLL1Q99990 258 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 FSHBP01225 129 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 OR4C5Q8NGB2 326 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 OR4X2Q8NGF9 303 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 LINC00527Q9UJ94 153 aa10.42□□□□□ -0.74
SMG6-203ENST00000536871 ACACBO00763 2458 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 IGHV3OR16-8A0A075B7F1 116 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 OVOL1O14753 267 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 Q8N976 141 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 FER1L6-AS1Q8NA97 138 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 NRGNQ92686 78 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
SMG6-203ENST00000536871 TDRG1Q3Y452 100 aa10.4□□□□□ -0.74
SMG6-203ENST00000536871 Q6ZN92 141 aa10.4□□□□□ -0.74
SMG6-203ENST00000536871 LINC00477Q96M19 166 aa10.4□□□□□ -0.74
SMG6-203ENST00000536871 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
SMG6-203ENST00000536871 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
SMG6-203ENST00000536871 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.74
SMG6-203ENST00000536871 VPREB3Q9UKI3 123 aa10.4□□□□□ -0.74
SMG6-203ENST00000536871 TRAV8-2A0A0B4J237 113 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 A1L4Q6 167 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 M0R2Z0 102 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 IGHV4-31P0DP07 118 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 FOXE3Q13461 319 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.75
SMG6-203ENST00000536871 LYZL1Q6UWQ5 148 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 NIT1Q86X76 327 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 GPHB5Q86YW7 130 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 DCHS2Q6V1P9 2916 aa10.4□□□□□ -0.75
SMG6-203ENST00000536871 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
SMG6-203ENST00000536871 PSMB8P28062 276 aa10.39□□□□□ -0.75
SMG6-203ENST00000536871 UFC1Q9Y3C8 167 aa10.39□□□□□ -0.75
SMG6-203ENST00000536871 ABCA2Q9BZC7 2435 aa10.39□□□□□ -0.75
SMG6-203ENST00000536871 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 IGHV7-4-1A0A0J9YVY3 117 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 K7ERU9 68 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 IGHV4-59P01825 116 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 TSPOP30536 169 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 KRTDAPP60985 99 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 Q5PR19 223 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 Q6YL49 198 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 Q8TAT8 98 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 CACNA1BQ00975 2339 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 MED13LQ71F56 2210 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
SMG6-203ENST00000536871 ORM1P02763 201 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 ELANEP08246 267 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 NTF3P20783 257 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 RNF182Q8N6D2 247 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
SMG6-203ENST00000536871 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
SMG6-203ENST00000536871 OCIAD2Q56VL3 154 aa10.37□□□□□ -0.75
SMG6-203ENST00000536871 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms