RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 LRRC20Q8TCA0 184 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 TMEM37Q8WXS4 190 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 PFDN5Q99471 154 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 SLC50A1Q9BRV3 221 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 MARVELD1Q9BSK0 173 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 NMES1Q9C002 83 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 DNAJC4Q9NNZ3 241 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 ZNF331Q9NQX6 463 aaPredicted RBP5.02□□□□□ -1.61
YBX3-206ENST00000536823 BATF3Q9NR55 127 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 SLC39A9Q9NUM3 307 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 APLNQ9ULZ1 77 aa5.02□□□□□ -1.61
YBX3-206ENST00000536823 IGHV4-4A0A075B6R2 117 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 E5RGE8 158 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 SLC17A3O00476 420 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 CRXO43186 299 aaPredicted RBP5.01□□□□□ -1.61
YBX3-206ENST00000536823 MPDU1O75352 247 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 RLN2P04090 185 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 SPART-AS1P0CW21 52 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 IGLC2P0DOY2 106 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 EMP1P54849 157 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 CYCSP99999 105 aaKnown RBP5.01□□□□□ -1.61
YBX3-206ENST00000536823 RRN3P1Q2M238 152 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 Q6ZRG5 221 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 ZNF767PQ75MW2 155 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 RPUSD4Q96CM3 377 aaKnown RBP5.01□□□□□ -1.61
YBX3-206ENST00000536823 TMEM208Q9BTX3 173 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 SLC25A31Q9H0C2 315 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 OR5AC2Q9NZP5 309 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 PXMP4Q9Y6I8 212 aa5.01□□□□□ -1.61
YBX3-206ENST00000536823 TRAV5A0A0B4J249 113 aa5□□□□□ -1.61
YBX3-206ENST00000536823 H3BQ15 152 aa5□□□□□ -1.61
YBX3-206ENST00000536823 H3BTX0 84 aa5□□□□□ -1.61
YBX3-206ENST00000536823 J3KRW8 73 aa5□□□□□ -1.61
YBX3-206ENST00000536823 SNRPCP09234 159 aaKnown RBP5□□□□□ -1.61
YBX3-206ENST00000536823 TSPOP30536 169 aa5□□□□□ -1.61
YBX3-206ENST00000536823 H2BFSP57053 126 aa5□□□□□ -1.61
YBX3-206ENST00000536823 RHOBP62745 196 aa5□□□□□ -1.61
YBX3-206ENST00000536823 GUK1Q16774 197 aa5□□□□□ -1.61
YBX3-206ENST00000536823 LRRC37A5PQ49AS3 106 aa5□□□□□ -1.61
YBX3-206ENST00000536823 TMEM256Q8N2U0 113 aa5□□□□□ -1.61
YBX3-206ENST00000536823 RPP25LQ8N5L8 163 aaKnown RBP5□□□□□ -1.61
YBX3-206ENST00000536823 PPP1R1CQ8WVI7 109 aa5□□□□□ -1.61
YBX3-206ENST00000536823 NIPSNAP3BQ9BS92 247 aa5□□□□□ -1.61
YBX3-206ENST00000536823 NPCDR1Q9BY65 106 aa5□□□□□ -1.61
YBX3-206ENST00000536823 TRAV12-2A0A075B6T6 113 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 ZNF705GA8MUZ8 300 aaPredicted RBP4.99□□□□□ -1.61
YBX3-206ENST00000536823 PRAC2D3DTV9 90 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 SSNA1O43805 119 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 ZNF253O75346 499 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 PET100P0DJ07 73 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 PRB4P10163 310 aaPredicted RBP4.99□□□□□ -1.61
YBX3-206ENST00000536823 PDE6HQ13956 83 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 CLINT1Q14677 625 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 OXA1LQ15070 435 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 CFAP161Q6P656 301 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 OR5C1Q8NGR4 320 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 OR10J6PQ8NGY7 276 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 THAP6Q8TBB0 222 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 MRPL53Q96EL3 112 aaKnown RBP4.99□□□□□ -1.61
YBX3-206ENST00000536823 SAT2Q96F10 170 aaPredicted RBP4.99□□□□□ -1.61
YBX3-206ENST00000536823 NDUFAF3Q9BU61 184 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 KCNIP2Q9NS61 270 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 PPP1R14DQ9NXH3 145 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 TMEM14CQ9P0S9 112 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 YTHDF2Q9Y5A9 579 aaKnown RBP4.99□□□□□ -1.61
YBX3-206ENST00000536823 PKHD1P08F94 4074 aa4.99□□□□□ -1.61
YBX3-206ENST00000536823 TRBV19A0A075B6N1 114 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 PLAC8L1A1L4L8 177 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 LYRM9A8MSI8 78 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 MPC2O95563 127 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 HIST1H1EP10412 219 aaKnown RBP4.98□□□□□ -1.61
YBX3-206ENST00000536823 CDKN1BP46527 198 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 DAD1P61803 113 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 GCSAMLQ5JQS6 135 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 FAM210BQ96KR6 192 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 ODF3Q96PU9 254 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 ATP5SQ99766 215 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 C20orf144Q9BQM9 153 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 WDR61Q9GZS3 305 aaKnown RBP4.98□□□□□ -1.61
YBX3-206ENST00000536823 ZNF586Q9NXT0 402 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 HSPB11Q9Y547 144 aa4.98□□□□□ -1.61
YBX3-206ENST00000536823 M0R3E3 92 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 NDUFB4O95168 129 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 PRM2P04554 102 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 PYYP10082 97 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 HTN3P15516 51 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 AZU1P20160 251 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 TAS2R60P59551 318 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 GFI1BQ5VTD9 330 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 MIR17HGQ75NE6 70 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 C16orf74Q96GX8 76 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 FAM167A-AS1Q96KT0 104 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 LINC01587Q99440 93 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 TM2D2Q9BX73 214 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 SLC25A2Q9BXI2 301 aa4.97□□□□□ -1.61
YBX3-206ENST00000536823 MRPL32Q9BYC8 188 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms