RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 SEC11BP0C7V7 166 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 PDE6HQ13956 83 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 SLC51BQ86UW2 128 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 OR11H4Q8NGC9 324 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
LMO3-213ENST00000536172 RAB5CP51148 216 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 PSG3Q16557 428 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 RRN3P1Q2M238 152 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 GCSAMLQ5JQS6 135 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 GDF5OSQ5U4N7 250 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 DPPA3Q6W0C5 159 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 OR4B1Q8NGF8 309 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
LMO3-213ENST00000536172 LOC102723971A0A1B0GUV8 181 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 A0A1B0GVG6 124 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 K7EQM0 130 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 LCE2BO14633 110 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 ZNF253O75346 499 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 CDK2AP2O75956 126 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 IGKV3-20P01619 116 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 OR10J4P0C629 311 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 HTN3P15516 51 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 DAD1P61803 113 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 RXFP4Q8TDU9 374 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
LMO3-213ENST00000536172 DNAH2Q9P225 4427 aa7.87□□□□□ -1.15
LMO3-213ENST00000536172 TRBV19A0A075B6N1 114 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 A0A0J9YX75 114 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 CTXND1A0A1B0GTU2 59 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 G3V3Q6 166 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 SOCS3O14543 225 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 SNRPCP09234 159 aaKnown RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 PYYP10082 97 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 TSPOP30536 169 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 PPT1P50897 306 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 FXYD7P58549 80 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 HIST1H1AQ02539 215 aaPredicted RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 LGALSLQ3ZCW2 172 aaPredicted RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 TMEM88Q6PEY1 159 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 FAM213BQ8TBF2 198 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 RPUSD4Q96CM3 377 aaKnown RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 ATG101Q9BSB4 218 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 TMEM208Q9BTX3 173 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 SLC25A2Q9BXI2 301 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 NKX6-2Q9C056 277 aaPredicted RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
LMO3-213ENST00000536172 ZNF331Q9NQX6 463 aaPredicted RBP7.86□□□□□ -1.15
LMO3-213ENST00000536172 LYRM9A8MSI8 78 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 A8MTW9 85 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 H3BTX0 84 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
LMO3-213ENST00000536172 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 ZNF575Q86XF7 245 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 C1orf158Q8N1D5 194 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 IGF2BP2-AS1Q96M15 143 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
LMO3-213ENST00000536172 DNAH17Q9UFH2 4485 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 PKD1P98161 4303 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 C16orf90A8MZG2 172 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 F6UZH7 168 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 H3BQ15 152 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 IFNA7P01567 189 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 ARL14EPLP0DKL9 152 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 ICAM4Q14773 271 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 MORN5Q5VZ52 161 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 RNF182Q8N6D2 247 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.15
LMO3-213ENST00000536172 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 ZNF586Q9NXT0 402 aa7.84□□□□□ -1.15
LMO3-213ENST00000536172 PGPA6NDG6 321 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 STAG3L3P0CL85 134 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 GCHFRP30047 84 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 CCL18P55774 89 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 DEFB1P60022 68 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 IGFL4Q6B9Z1 124 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 OR8A1Q8NGG7 326 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 PHYHIPLQ96FC7 376 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 C17orf77Q96MU5 243 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 OTORQ9NRC9 128 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 RYR1P21817 5038 aa7.83□□□□□ -1.16
LMO3-213ENST00000536172 NBDYA0A0U1RRE5 68 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 F6UB75 175 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 INSP01308 110 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 IFNA1P01562 189 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
LMO3-213ENST00000536172 LEPP41159 167 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 BLOC1S1P78537 153 aa7.82□□□□□ -1.16
LMO3-213ENST00000536172 CST9LP1Q5W188 147 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms