RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 C5orf64Q2M2E5 130 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 LGALS9BQ3B8N2 356 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 LGALS9CQ6DKI2 356 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 LYPD1Q8N2G4 141 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 OOSP1A8MZH6 123 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 KALRNO60229 2985 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 ADORA2A-AS1P86434 159 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 PRB3Q04118 309 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-203ENST00000535977 CFHR4Q92496 578 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 MRPL16Q9NX20 251 aaKnown RBP14.09□□□□□ -0.15
RAB40C-203ENST00000535977 K7EIM0 57 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 IGKV1-17P01599 117 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 C11orf71Q6IPW1 123 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 PHLDA1Q8WV24 401 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-203ENST00000535977 SHANK2-AS3Q9BTD1 123 aa14.09□□□□□ -0.15
RAB40C-203ENST00000535977 ODF3BA8MYP8 253 aa14.08□□□□□ -0.15
RAB40C-203ENST00000535977 HAX1O00165 279 aa14.08□□□□□ -0.16
RAB40C-203ENST00000535977 TSPAN13O95857 204 aa14.07□□□□□ -0.16
RAB40C-203ENST00000535977 GATA3P23771 443 aa14.07□□□□□ -0.16
RAB40C-203ENST00000535977 SIGLEC8Q9NYZ4 499 aa14.07□□□□□ -0.16
RAB40C-203ENST00000535977 IFI27P40305 119 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-203ENST00000535977 H3BMG7 143 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 H3BRN7 92 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 MTURNQ8N3F0 131 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-203ENST00000535977 FXYD7P58549 80 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 NPIPB6E9PJ23 425 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 K7EMI3 77 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 ZNF562Q6V9R5 426 aa14.06□□□□□ -0.16
RAB40C-203ENST00000535977 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
RAB40C-203ENST00000535977 TRBV19A0A075B6N1 114 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 MINOS1Q5TGZ0 78 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 Q86TA4 180 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 MINOS1-NBL1R4GNA1 71 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 E9PLD3 99 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 DTX2Q86UW9 622 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 ZNF418Q8TF45 676 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-203ENST00000535977 C20orf78Q9BR46 151 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 SS18L2Q9UHA2 77 aa14.05□□□□□ -0.16
RAB40C-203ENST00000535977 LOC389332A0A1B0GUA5 103 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 WI2-2373I1.2A0A1W2PRP0 233 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 OVOL3O00110 214 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 MFAP4P55083 255 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 ZNF491Q8N8L2 437 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 TMEM75Q8N9X5 138 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 SCGB2A1O75556 95 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 AMTNQ6UX39 209 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 ZNF414Q96IQ9 312 aa14.04□□□□□ -0.16
RAB40C-203ENST00000535977 NBASA2RRP1 2371 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 HES1Q14469 280 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 C8orf86Q6ZUL3 223 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 IGLL5B9A064 214 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 ARMS2P0C7Q2 107 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 COL8A1P27658 744 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 TTC9CQ8N5M4 171 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
RAB40C-203ENST00000535977 PDE6HQ13956 83 aa14.02□□□□□ -0.16
RAB40C-203ENST00000535977 EBI3Q14213 229 aa14.02□□□□□ -0.16
RAB40C-203ENST00000535977 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.16
RAB40C-203ENST00000535977 H3BTX0 84 aa14.02□□□□□ -0.17
RAB40C-203ENST00000535977 LY6HO94772 140 aa14.02□□□□□ -0.17
RAB40C-203ENST00000535977 IGLV2-11P01706 119 aa14.02□□□□□ -0.17
RAB40C-203ENST00000535977 RNF183Q96D59 192 aa14.02□□□□□ -0.17
RAB40C-203ENST00000535977 DKK2Q9UBU2 259 aa14.02□□□□□ -0.17
RAB40C-203ENST00000535977 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 IL4P05112 153 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 SPINK8P0C7L1 97 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 CDSNQ15517 529 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 Q71RC1 249 aaPredicted RBP14.01□□□□□ -0.17
RAB40C-203ENST00000535977 IGFBPL1Q8WX77 278 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 PGPEP1Q9NXJ5 209 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 PSG8Q9UQ74 426 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 IGKV2D-26A0A0A0MRZ7 120 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 A0A1B0GUT8 65 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 GAGE13Q4V321 117 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 EXOC3-AS1Q8N2X6 119 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 ZNF479Q96JC4 524 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 ANKHD1Q8IWZ3 2542 aaKnown RBP14.01□□□□□ -0.17
RAB40C-203ENST00000535977 RELNP78509 3460 aa14.01□□□□□ -0.17
RAB40C-203ENST00000535977 OR11H12B2RN74 326 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 KLRD1Q13241 179 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 VMO1Q7Z5L0 202 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 CIARTQ8N365 385 aaPredicted RBP14□□□□□ -0.17
RAB40C-203ENST00000535977 OR11H1Q8NG94 326 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 OR11H2Q8NH07 326 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 PRO0461Q9UI25 63 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 IGSF10Q6WRI0 2623 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 SIGLEC15Q6ZMC9 328 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 CDIP1Q9H305 208 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 HIGD1BQ9P298 99 aa14□□□□□ -0.17
RAB40C-203ENST00000535977 Q8N6K4 173 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 ZNF502Q8TBZ5 544 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 FANCD2OSQ96PS1 177 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 MRPS12O15235 138 aaKnown RBP13.99□□□□□ -0.17
RAB40C-203ENST00000535977 MT-ATP8P03928 68 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 SYT8Q8NBV8 401 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms