RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 OR4C46A6NHA9 309 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 MFAP4P55083 255 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 MLST8Q9BVC4 326 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 ANKRD17O75179 2603 aaKnown RBP6.18□□□□□ -1.42
COL21A1-212ENST00000535941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.17□□□□□ -1.42
COL21A1-212ENST00000535941 TRBV7-1A0A0A6YYK4 115 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 TRBV7-9A0A0J9YWB2 115 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 TCF24Q7RTU0 167 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 FAM181BA6NEQ2 426 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 H3BUT2 72 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 COX7A2P2O60397 106 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 IGHG4P01861 327 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 HES1Q14469 280 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 PLGLAQ15195 96 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 BCL6BQ8N143 479 aaPredicted RBP6.17□□□□□ -1.42
COL21A1-212ENST00000535941 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 TMEM160Q9NX00 188 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 C21orf62Q9NYP8 219 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 SMPXQ9UHP9 88 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 hDV102S1A0JD36 115 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 ZNF785A8K8V0 405 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 H0Y8G0 127 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 APELAP0DMC3 54 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 PDE6HQ13956 83 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 PAXXQ9BUH6 204 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 SERTAD4Q9NUC0 356 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 SMAD5-AS1Q9Y6J3 95 aa6.17□□□□□ -1.42
COL21A1-212ENST00000535941 SPTBN1Q01082 2364 aaKnown RBP6.16□□□□□ -1.42
COL21A1-212ENST00000535941 NCBP2LA6PVI3 153 aaKnown RBP6.16□□□□□ -1.42
COL21A1-212ENST00000535941 RNF223E7ERA6 249 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 APCSP02743 223 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 PYYP10082 97 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 DEFB112Q30KQ8 113 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 SIGLEC15Q6ZMC9 328 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 FAM231DQ6ZW35 169 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 OR2K2Q8NGT1 345 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 CHD6Q8TD26 2715 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 TRBV19A0A075B6N1 114 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 TRAV41A0A0B4J266 112 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 HLA-DQA1P01909 254 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 PSMB8P28062 276 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 HSD52Q0P140 79 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 Q6ZS46 218 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 TMEM86BQ8N661 226 aa6.16□□□□□ -1.42
COL21A1-212ENST00000535941 ZNF331Q9NQX6 463 aaPredicted RBP6.16□□□□□ -1.42
COL21A1-212ENST00000535941 G3V318 75 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 H3BUX3 64 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 J3QR89 54 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 LTAP01374 205 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 GPR183P32249 361 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 COX19Q49B96 90 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 EBLN2Q6P2I7 272 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 Q96MF0 132 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 ZNF702PQ9H963 129 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 TIMM8BQ9Y5J9 83 aaPredicted RBP6.15□□□□□ -1.42
COL21A1-212ENST00000535941 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 BMPR1BO00238 502 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 CRYBB3P26998 211 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 HIST1H1AQ02539 215 aaPredicted RBP6.15□□□□□ -1.42
COL21A1-212ENST00000535941 TMEM219Q86XT9 240 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 BLNKQ8WV28 456 aa6.15□□□□□ -1.42
COL21A1-212ENST00000535941 MYO18BQ8IUG5 2567 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 ZANQ9Y493 2812 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 A6NDN8 102 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 B5MCH6 92 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 SNAI2O43623 268 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 HIST1H1EP10412 219 aaKnown RBP6.15□□□□□ -1.43
COL21A1-212ENST00000535941 C15orf32Q32M92 178 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 ANXA2RQ3ZCQ2 193 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 BPIFA4PQ86YQ2 179 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 OR10AG1Q8NH19 301 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 RAB37Q96AX2 223 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 TMEM191AQ9H0A3 160 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 OTORQ9NRC9 128 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 VPREB3Q9UKI3 123 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.43
COL21A1-212ENST00000535941 V9GYV3 84 aa6.15□□□□□ -1.43
COL21A1-212ENST00000535941 K7EP34 96 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 ISLRO14498 428 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 USMG5Q96IX5 58 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 SPCS1Q9Y6A9 102 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 IGHV3OR16-10A0A075B7F0 116 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 IGHV3-21A0A0B4J1V1 117 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 A4D1N5 150 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 OR2J3O76001 311 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 SMIM17P0DL12 118 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 UBE2L3P68036 154 aaKnown RBP6.14□□□□□ -1.43
COL21A1-212ENST00000535941 PSG3Q16557 428 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 TMEM136Q6ZRR5 245 aa6.14□□□□□ -1.43
COL21A1-212ENST00000535941 CIARTQ8N365 385 aaPredicted RBP6.14□□□□□ -1.43
COL21A1-212ENST00000535941 TMEM75Q8N9X5 138 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms