RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 M0QZ24 198 aa15.32■□□□□ 0.04
TNFRSF1A-205ENST00000534885 GCGP01275 180 aa15.32■□□□□ 0.04
TNFRSF1A-205ENST00000534885 CSN3P07498 182 aa15.32■□□□□ 0.04
TNFRSF1A-205ENST00000534885 WFDC3Q8IUB2 231 aa15.32■□□□□ 0.04
TNFRSF1A-205ENST00000534885 MS4A6AQ9H2W1 248 aa15.32■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ELOBQ15370 118 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 MRPL53Q96EL3 112 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 CTDSP1Q9GZU7 261 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 TMEM242Q9NWH2 141 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 H7BYZ3 331 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 TFPI2P48307 235 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 RNASE7Q9H1E1 156 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 URGCP-MRPS24S4R325 110 aa15.31■□□□□ 0.04
TNFRSF1A-205ENST00000534885 TRBV6-1A0A0K0K1D8 114 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 FOXL1Q12952 345 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ERCC8Q13216 396 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 PRR27Q6MZM9 219 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 NDUFA11Q86Y39 141 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 Q8TAT8 98 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ANAPC16Q96DE5 110 aa15.3■□□□□ 0.04
TNFRSF1A-205ENST00000534885 DEFB1P60022 68 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ERVFC1-1P60608 527 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ZNF738Q8NE65 137 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 SMIM12Q96EX1 92 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 CLEC5AQ9NY25 188 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ATRQ13535 2644 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 CXCL1P09341 107 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 OR10G8Q8NGN5 311 aa15.29■□□□□ 0.04
TNFRSF1A-205ENST00000534885 OVOL1O14753 267 aa15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 NIT2Q9NQR4 276 aa15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ZNF705DP0CH99 300 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ZNF705BP0CI00 300 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 LINC00322Q6ZN03 302 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 ZFP30Q9Y2G7 519 aa15.28■□□□□ 0.04
TNFRSF1A-205ENST00000534885 SORL1Q92673 2214 aa15.27■□□□□ 0.04
TNFRSF1A-205ENST00000534885 RBAKDNA6NC62 111 aa15.27■□□□□ 0.03
TNFRSF1A-205ENST00000534885 HOXA5P20719 270 aa15.27■□□□□ 0.03
TNFRSF1A-205ENST00000534885 IBA57Q5T440 356 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-205ENST00000534885 C8orf49Q96NF6 230 aa15.27■□□□□ 0.03
TNFRSF1A-205ENST00000534885 K7EQG2 157 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PPP1R2P9O14990 202 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 TMEM61Q8N0U2 210 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 DYNLRB2Q8TF09 96 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZC2HC1AQ96GY0 325 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 GPR61Q9BZJ8 451 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 V9GYV3 84 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 TGIF2-C20orf24A0A0A6YYL0 155 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 LINC00587B1AMM8 73 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PRR25Q96S07 402 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 AGPAT4-IT1Q9H0P7 198 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 GSN-AS1Q9NRJ2 163 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 OSTCQ9NRP0 149 aa15.26■□□□□ 0.03
TNFRSF1A-205ENST00000534885 F6UB75 175 aa15.25■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZNF688P0C7X2 276 aa15.25■□□□□ 0.03
TNFRSF1A-205ENST00000534885 SAMD13Q5VXD3 122 aa15.25■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ID1P41134 155 aa15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 DEFB114Q30KQ6 69 aa15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 NUDT10Q8NFP7 164 aa15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 NUDT11Q96G61 164 aa15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 FBLL1A6NHQ2 334 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 NDUFA6P56556 154 aa15.24■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZNF124Q15973 351 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 CD300EQ496F6 205 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 RBPMS2Q6ZRY4 209 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 C9orf47Q6ZRZ4 202 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 FAM231DQ6ZW35 169 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PFN1P07737 140 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PAFAH1B2P68402 229 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 KRTAP24-1Q3LI83 254 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PSMG4Q5JS54 123 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 TMEM78Q5T7P6 136 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 CITED1Q99966 193 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 PPP1R14DQ9NXH3 145 aa15.23■□□□□ 0.03
TNFRSF1A-205ENST00000534885 C19orf71A6NCJ1 209 aa15.22■□□□□ 0.03
TNFRSF1A-205ENST00000534885 CA1P00915 261 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-205ENST00000534885 S100PP25815 95 aa15.22■□□□□ 0.03
TNFRSF1A-205ENST00000534885 CRIP1P50238 77 aa15.22■□□□□ 0.03
TNFRSF1A-205ENST00000534885 SAPCD1Q5SSQ6 148 aa15.22■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZNF705GA8MUZ8 300 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZNF138P52744 262 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 FAM3BP58499 235 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 SNRPD3P62318 126 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 OR8A1Q8NGG7 326 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 SIGLEC8Q9NYZ4 499 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 OR10J6PQ8NGY7 276 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 FAM210BQ96KR6 192 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 ZNF492Q9P255 531 aa15.21■□□□□ 0.03
TNFRSF1A-205ENST00000534885 FBN1P35555 2871 aaKnown RBP15.21■□□□□ 0.02
TNFRSF1A-205ENST00000534885 IZUMO1RA6ND01 250 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BKO60814 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 PF4P02776 101 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BJP06899 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BOP23527 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BBP33778 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BDP58876 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BCP62807 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H1AQ02539 215 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST2H2BEQ16778 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms