RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GUCA2BQ16661 112 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 MAJINQ3KP22 176 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 TMEM75Q8N9X5 138 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 DLX4Q92988 240 aaPredicted RBP8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 C17orf77Q96MU5 243 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 NDFIP1Q9BT67 221 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 SDF2L1Q9HCN8 221 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 KLF12Q9Y4X4 402 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 SMAD5-AS1Q9Y6J3 95 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 TRAV2A0A0B4J234 112 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 DIRC3C9JPN6 131 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 PPP1R2P9O14990 202 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 CENPWQ5EE01 88 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 GOLT1AQ6ZVE7 132 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 ZFP30Q9Y2G7 519 aa8.27□□□□□ -1.09
CCDC90B-218ENST00000533761 A0A087WWC5 75 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 TRAV25A0A0B4J276 109 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 GNG5P63218 68 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 SAPCD1Q5SSQ6 148 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 LCN12Q6JVE5 192 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 LINC01551Q86U37 167 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 C15orf54Q8N8G6 183 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 DERL1Q9BUN8 251 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 RPS10P5Q9NQ39 176 aa8.26□□□□□ -1.09
CCDC90B-218ENST00000533761 VWFP04275 2813 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 CT45A10P0DMU9 189 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 FLI1Q01543 452 aaPredicted RBP8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 PSG3Q16557 428 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 PRR31Q5SQ13 230 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 ZNF738Q8NE65 137 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 OR10J6PQ8NGY7 276 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 MS4A6AQ9H2W1 248 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 TMEM242Q9NWH2 141 aa8.25□□□□□ -1.09
CCDC90B-218ENST00000533761 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 OR4C46A6NHA9 309 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 M0R3E3 92 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 TSPAN4O14817 238 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 LTAP01374 205 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 WFDC9Q8NEX5 89 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 OR2K2Q8NGT1 345 aa8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 SPAG8Q99932 426 aaPredicted RBP8.24□□□□□ -1.09
CCDC90B-218ENST00000533761 IGKV3-7A0A075B6H7 116 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 CXorf65A6NEN9 183 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 CSN3P07498 182 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 MGST1P10620 155 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 COTL1Q14019 142 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 Q86TA4 180 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 MCRIP2Q9BUT9 160 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 SMCO4Q9NRQ5 59 aa8.23□□□□□ -1.09
CCDC90B-218ENST00000533761 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 SOCS3O14543 225 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 S100PP25815 95 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 INSL3P51460 131 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 ERVFC1-1P60608 527 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 TMEM183AQ8IXX5 376 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 ISOC2Q96AB3 205 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 DAZAP1Q96EP5 407 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 BTF3L4Q96K17 158 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 PSG8Q9UQ74 426 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 LENEPQ9Y5L5 61 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 TRAV34A0A0B4J273 112 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 H7BYZ3 331 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 SAP30O75446 220 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 RPL19P84098 196 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 DEFB114Q30KQ6 69 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 GBGT1Q8N5D6 347 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 RNF182Q8N6D2 247 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 OCC1Q8TAD7 63 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 LINC00479Q96M42 142 aa8.22□□□□□ -1.09
CCDC90B-218ENST00000533761 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.09
CCDC90B-218ENST00000533761 TRBV7-9A0A0J9YWB2 115 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 K7EQG2 157 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 GCGP01275 180 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 IBA57Q5T440 356 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 EBLN2Q6P2I7 272 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 TUBA4BQ9H853 241 aa8.21□□□□□ -1.1
CCDC90B-218ENST00000533761 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 TRAV8-1A0A0A6YYK1 113 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 TFPI2P48307 235 aa8.2□□□□□ -1.1
CCDC90B-218ENST00000533761 ZNF138P52744 262 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms