RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
NXF1-215ENST00000533440 PCNPQ8WW12 178 aaKnown RBP5.14□□□□□ -1.59
NXF1-215ENST00000533440 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
NXF1-215ENST00000533440 SCGB3A2Q96PL1 93 aa5.14□□□□□ -1.59
NXF1-215ENST00000533440 TXNDC17Q9BRA2 123 aa5.14□□□□□ -1.59
NXF1-215ENST00000533440 Q9HAA7 133 aa5.14□□□□□ -1.59
NXF1-215ENST00000533440 STRAPQ9Y3F4 350 aaKnown RBP5.14□□□□□ -1.59
NXF1-215ENST00000533440 IGHV1OR15-1A0A075B7D0 117 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 FNDC10F2Z333 226 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 H3BQ15 152 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 IGLV2-8P01709 118 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 SFTA3P0C7M3 94 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 CRISP2P16562 243 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 ERCC8Q13216 396 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 MORN5Q5VZ52 161 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 SMIM4Q8WVI0 70 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 AP3S1Q92572 193 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 LINC00477Q96M19 166 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 NPVFQ9HCQ7 196 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 SCP2D1Q9UJQ7 156 aa5.13□□□□□ -1.59
NXF1-215ENST00000533440 ANKRD20A5PA0PJZ0 165 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 C9JCJ5 164 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 CTDSPLO15194 276 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 ZNF253O75346 499 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 NMBP08949 121 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 OR4E1P0C645 316 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 RNASE4P34096 147 aaKnown RBP5.12□□□□□ -1.59
NXF1-215ENST00000533440 HNRNPA3P51991 378 aaKnown RBP5.12□□□□□ -1.59
NXF1-215ENST00000533440 SLC38A11Q08AI6 406 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 LAGE3Q14657 143 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 OPCMLQ14982 345 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 GUK1Q16774 197 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 LINC01620Q4KN68 170 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 Q6ZQT7 251 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 SH2D6Q7Z4S9 175 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 TMEM37Q8WXS4 190 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 RASL10AQ92737 203 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 MRPL53Q96EL3 112 aaKnown RBP5.12□□□□□ -1.59
NXF1-215ENST00000533440 DAZAP1Q96EP5 407 aaKnown RBP5.12□□□□□ -1.59
NXF1-215ENST00000533440 FUNDC2Q9BWH2 189 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 TM2D2Q9BX73 214 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 MIXL1Q9H2W2 232 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 RABL2BQ9UNT1 228 aa5.12□□□□□ -1.59
NXF1-215ENST00000533440 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.11□□□□□ -1.59
NXF1-215ENST00000533440 LOC100131303A0A0U1RQF7 123 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 M0R3E3 92 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 RGS13O14921 159 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 CCNKO75909 580 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 GPX1P07203 203 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 TNFSF8P32971 234 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 RRAS2P62070 204 aaPredicted RBP5.11□□□□□ -1.59
NXF1-215ENST00000533440 ZNF846Q147U1 533 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 ACOT6Q3I5F7 207 aaPredicted RBP5.11□□□□□ -1.59
NXF1-215ENST00000533440 TMEM128Q5BJH2 165 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 PRR9Q5T870 116 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 ZFAND2AQ8N6M9 145 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 OR10P1Q8NGE3 313 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 ARPC5LQ9BPX5 153 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 SLC25A31Q9H0C2 315 aa5.11□□□□□ -1.59
NXF1-215ENST00000533440 TRAV8-6A0A0B4J262 113 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 TRAV4A0A0B4J268 109 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 GOSR2O14653 212 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 LECT2O14960 151 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 AGPAT2O15120 278 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 COX7A2P2O60397 106 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 IGLV2-11P01706 119 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 IGHV3-30P01768 117 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 IGHV3-33P01772 117 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 IGHV3-30-5P0DP03 117 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 RPL37AP61513 92 aaKnown RBP5.1□□□□□ -1.59
NXF1-215ENST00000533440 POLR2GP62487 172 aaKnown RBP eCLIP5.1□□□□□ -1.59
NXF1-215ENST00000533440 TMEM14EPQ6UXP3 125 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 C9orf47Q6ZRZ4 202 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 ZNF546Q86UE3 836 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 VCX3AQ9NNX9 186 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 DNAJC4Q9NNZ3 241 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 PSENENQ9NZ42 101 aa5.1□□□□□ -1.59
NXF1-215ENST00000533440 TRBV19A0A075B6N1 114 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 A0A087WXM4 84 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 NDUFB4O95168 129 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 HOXB5P09067 269 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 PPT1P50897 306 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 LELP1Q5T871 98 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 C10orf113Q5VZT2 155 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 NHLRC2Q8NBF2 726 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 SMIM8Q96KF7 97 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 SPXQ9BT56 116 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 SRRQ9GZT4 340 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 MCUBQ9NWR8 336 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 CCDC59Q9P031 241 aaKnown RBP5.09□□□□□ -1.59
NXF1-215ENST00000533440 PRELID1Q9Y255 219 aa5.09□□□□□ -1.59
NXF1-215ENST00000533440 TRAV8-3A0A0A6YYJ7 113 aa5.08□□□□□ -1.6
NXF1-215ENST00000533440 RNF222A6NCQ9 220 aa5.08□□□□□ -1.6
NXF1-215ENST00000533440 RBFOX3A6NFN3 312 aa5.08□□□□□ -1.6
NXF1-215ENST00000533440 CTDSP2O14595 271 aa5.08□□□□□ -1.6
NXF1-215ENST00000533440 SFT2D2O95562 160 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms