RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 FAM19A4Q96LR4 140 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 ATP5SQ99766 215 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 LINC00467Q9BRT7 94 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 FUT9Q9Y231 359 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 HERC2O95714 4834 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 IGLV2-18A0A075B6J9 118 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 CRISP2P16562 243 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 EXOC3-AS1Q8N2X6 119 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 AGPAT4-IT1Q9H0P7 198 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 BATF3Q9NR55 127 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 HSPB11Q9Y547 144 aa16.44■□□□□ 0.22
SMPD1-209ENST00000533196 A0A1B0GVY2 172 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 PRSS29PA6NIE9 313 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 NUDT3O95989 172 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 DAZ2Q13117 558 aaKnown RBP16.43■□□□□ 0.22
SMPD1-209ENST00000533196 ICAM4Q14773 271 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 ZNF680Q8NEM1 530 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 PAXXQ9BUH6 204 aa16.43■□□□□ 0.22
SMPD1-209ENST00000533196 CCL18P55774 89 aa16.42■□□□□ 0.22
SMPD1-209ENST00000533196 ERCC8Q13216 396 aa16.42■□□□□ 0.22
SMPD1-209ENST00000533196 TMEM78Q5T7P6 136 aa16.42■□□□□ 0.22
SMPD1-209ENST00000533196 ZNF324O75467 553 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-209ENST00000533196 LYPD1Q8N2G4 141 aa16.41■□□□□ 0.22
SMPD1-209ENST00000533196 RNF141Q8WVD5 230 aa16.41■□□□□ 0.22
SMPD1-209ENST00000533196 FXYD5Q96DB9 178 aa16.41■□□□□ 0.22
SMPD1-209ENST00000533196 ZNF503Q96F45 646 aa16.41■□□□□ 0.22
SMPD1-209ENST00000533196 TRBV7-9A0A0J9YWB2 115 aa16.4■□□□□ 0.22
SMPD1-209ENST00000533196 IFNA5P01569 189 aa16.4■□□□□ 0.22
SMPD1-209ENST00000533196 RPL12P30050 165 aaKnown RBP16.4■□□□□ 0.22
SMPD1-209ENST00000533196 ANXA2RQ3ZCQ2 193 aa16.4■□□□□ 0.22
SMPD1-209ENST00000533196 SCGB1C1Q8TD33 95 aa16.4■□□□□ 0.22
SMPD1-209ENST00000533196 GPX1P07203 203 aa16.39■□□□□ 0.21
SMPD1-209ENST00000533196 FAM122CQ6P4D5 195 aa16.39■□□□□ 0.21
SMPD1-209ENST00000533196 EIF4E3Q8N5X7 224 aaKnown RBP16.39■□□□□ 0.21
SMPD1-209ENST00000533196 C18orf15Q96N68 181 aa16.39■□□□□ 0.21
SMPD1-209ENST00000533196 ZNF492Q9P255 531 aa16.39■□□□□ 0.21
SMPD1-209ENST00000533196 DNAH11Q96DT5 4516 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GAGE12BA1L429 117 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 H3BNG1 76 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 OR7C2O60412 319 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GAGE7O76087 117 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GAGE12FP0CL80 117 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GAGE12GP0CL81 117 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GAGE12IP0CL82 117 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 M6PRP20645 277 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 TAS2R45P59539 299 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 CD300CQ08708 224 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 OR5I1Q13606 314 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 C1orf134Q5TEV5 83 aa16.38■□□□□ 0.21
SMPD1-209ENST00000533196 GNPNAT1Q96EK6 184 aaPredicted RBP16.38■□□□□ 0.21
SMPD1-209ENST00000533196 KIAA1109Q2LD37 5005 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-209ENST00000533196 RBAKDNA6NC62 111 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-209ENST00000533196 OR10J4P0C629 311 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 RNASE4P34096 147 aaKnown RBP16.37■□□□□ 0.21
SMPD1-209ENST00000533196 CSN1S1P47710 185 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 BTN1A1Q13410 526 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 KHDC3LQ587J8 217 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 FFAR4Q5NUL3 377 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 C11orf72Q8NBR9 251 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 ZNRF2Q8NHG8 242 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 RXFP4Q8TDU9 374 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 MBD2Q9UBB5 411 aa16.37■□□□□ 0.21
SMPD1-209ENST00000533196 DYNC1H1Q14204 4646 aaKnown RBP16.37■□□□□ 0.21
SMPD1-209ENST00000533196 TRAV26-1A0A087WT03 109 aa16.36■□□□□ 0.21
SMPD1-209ENST00000533196 ZFAND2AQ8N6M9 145 aa16.36■□□□□ 0.21
SMPD1-209ENST00000533196 PHYHIPLQ96FC7 376 aa16.36■□□□□ 0.21
SMPD1-209ENST00000533196 VGLL1Q99990 258 aa16.36■□□□□ 0.21
SMPD1-209ENST00000533196 MUC4Q99102 2169 aa16.36■□□□□ 0.21
SMPD1-209ENST00000533196 ZNF138P52744 262 aa16.35■□□□□ 0.21
SMPD1-209ENST00000533196 UBE2L3P68036 154 aaKnown RBP16.35■□□□□ 0.21
SMPD1-209ENST00000533196 IBA57Q5T440 356 aaKnown RBP16.35■□□□□ 0.21
SMPD1-209ENST00000533196 Q6ZTI0 123 aa16.35■□□□□ 0.21
SMPD1-209ENST00000533196 GSN-AS1Q9NRJ2 163 aa16.35■□□□□ 0.21
SMPD1-209ENST00000533196 LINC00588Q9Y4M8 146 aa16.35■□□□□ 0.21
SMPD1-209ENST00000533196 NBDYA0A0U1RRE5 68 aa16.34■□□□□ 0.21
SMPD1-209ENST00000533196 HOXA5P20719 270 aa16.34■□□□□ 0.21
SMPD1-209ENST00000533196 TCL1AP56279 114 aa16.34■□□□□ 0.21
SMPD1-209ENST00000533196 RANP62826 216 aaKnown RBP16.34■□□□□ 0.21
SMPD1-209ENST00000533196 SMIM3Q9BZL3 60 aa16.34■□□□□ 0.21
SMPD1-209ENST00000533196 PKHD1P08F94 4074 aa16.34■□□□□ 0.21
SMPD1-209ENST00000533196 RGS13O14921 159 aa16.33■□□□□ 0.2
SMPD1-209ENST00000533196 Q9H3A6 140 aa16.33■□□□□ 0.2
SMPD1-209ENST00000533196 TRGV2A0A075B6R0 118 aa16.32■□□□□ 0.2
SMPD1-209ENST00000533196 IGHV1OR15-1A0A075B7D0 117 aa16.32■□□□□ 0.2
SMPD1-209ENST00000533196 SSX7Q7RTT5 188 aa16.32■□□□□ 0.2
SMPD1-209ENST00000533196 TMPRSS5Q9H3S3 457 aa16.32■□□□□ 0.2
SMPD1-209ENST00000533196 LENEPQ9Y5L5 61 aa16.32■□□□□ 0.2
SMPD1-209ENST00000533196 PKD1P98161 4303 aa16.31■□□□□ 0.2
SMPD1-209ENST00000533196 SPINK4O60575 86 aa16.31■□□□□ 0.2
SMPD1-209ENST00000533196 ACOT6Q3I5F7 207 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-209ENST00000533196 PRR9Q5T870 116 aa16.31■□□□□ 0.2
SMPD1-209ENST00000533196 ARPC5LQ9BPX5 153 aa16.31■□□□□ 0.2
SMPD1-209ENST00000533196 TRGV1A0A0A0MS02 117 aa16.3■□□□□ 0.2
SMPD1-209ENST00000533196 A0A0J9YY99 117 aa16.3■□□□□ 0.2
SMPD1-209ENST00000533196 ZNF266Q14584 549 aa16.3■□□□□ 0.2
SMPD1-209ENST00000533196 PQLC2Q6ZP29 291 aa16.3■□□□□ 0.2
SMPD1-209ENST00000533196 TMED6Q8WW62 240 aa16.3■□□□□ 0.2
SMPD1-209ENST00000533196 WFDC1Q9HC57 220 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms